fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G15360.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sm020434 not found in 224aa AT1G15360.1 1st_1st 0.398773006 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G15360.1     MVQTKKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKT
Sm020434_Selmo1 MGRPQRYRGVRQRHWGSWVSEIRHPLLKTRVWLGTFETAEDAARAYDEAARLMGGPRART
                * :.:::************:******** *:*********:********* **.* .*:*

AT1G15360.1     NFPLNNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKC---------C-----
Sm020434_Selmo1 NFPYDPN-----------------APPHPSSSTLLSTLSAKLNRCFSSSSSSSSCSTDPH
                *** : *                  .. .***:* * *****.:*         *     

AT1G15360.1     -KSP--SPSLTCLRLDTASSHIGVWQKRAGSKSDSSWVMTVELGPASSSQETTSKASQDA
Sm020434_Selmo1 KKDPRVSQSLTCLRLDPEQSNLGIWQKKSGRQPESNWVMKVHFG-----SQGGGGVSSDI
                 *.*  * ********. .*::*:***::* :.:*.***.*.:*     .:  . .*.* 

AT1G15360.1     IL-----APTTEVEIGGSREEVLDEEEKVALQMIEELLNTN-------------------
Sm020434_Selmo1 VLPTDNPAPPQPIE-----HKKMKSEEDLATEMIEELLNFPDSSSPSSSTSSSEAKNPNF
                :*     **.  :*     .: :..**.:* :*******                     

AT1G15360.1     -----------
Sm020434_Selmo1 SSSDLLHHILV
BoxShade v3.31 C (beta, 970507) Output
AT1G15360.1     M V Q T K K F R G V R Q R H W G S W V A E I R H P L L K R R I W L G T F E T A E E A A R A Y D E A A V L M S G R N A K T
Sm020434_Selmo1    M G R P Q R Y R G V R Q R H W G S W V S E I R H P L L K T R V W L G T F E T A E D A A R A Y D E A A R L M G G P R A R T
 
AT1G15360.1     N F P L N N N N T G E T S E G K T D I S A S S T M S S S T S S S S L S S I L S A K L R K C - - - - - - - - - C - - - - -
Sm020434_Selmo1    N F P Y D P N - - - - - - - - - - - - - - - - - A P P H P S S S T L L S T L S A K L N R C F S S S S S S S S C S T D P H
 
AT1G15360.1     - K S P - - S P S L T C L R L D T A S S H I G V W Q K R A G S K S D S S W V M T V E L G P A S S S Q E T T S K A S Q D A
Sm020434_Selmo1    K K D P R V S Q S L T C L R L D P E Q S N L G I W Q K K S G R Q P E S N W V M K V H F G - - - - - S Q G G G G V S S D I
 
AT1G15360.1     I L - - - - - A P T T E V E I G G S R E E V L D E E E K V A L Q M I E E L L N T N - - - - - - - - - - - - - - - - - - -
Sm020434_Selmo1    V L P T D N P A P P Q P I E - - - - - H K K M K S E E D L A T E M I E E L L N F P D S S S P S S S T S S S E A K N P N F
 
AT1G15360.1     - - - - - - - - - - -
Sm020434_Selmo1    S S S D L L H H I L V
 
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