Input
| Putative repression domain
|
|
AT1G15360.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt008236 |
not found in 178aa |
AT5G11190.1 |
not_not |
0.567484662 |
III |
Pt005519 |
not found in 208aa |
AT5G11190.1 |
not_not |
0.558282208 |
III |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)
AT1G15360.1 ----------------MVQTKKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAAR
pt008236_POPTR_ ----------------MVQSKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAAR
pt005519_POPTR_ MILICSSVFLSFLSQIMVQSKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAAR
***:*********:*****:**********:********* ***
AT1G15360.1 AYDEAAVLMSGRNAKTNFPLNNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRK
pt008236_POPTR_ AYDQAAILMNGQNAKTNFPTSHLDQ-DTNLGKDN-------NSPLPAKALAELLNSKLRK
pt005519_POPTR_ AYDQAAILMNGQNAKTNFPASHLDQ-DTKLGKDN-------NSPLPAKALAELLYSKLRK
***:**:**.*:******* .: : :*. ** : .*. .:.:*:.:* :****
AT1G15360.1 CC-KSPSPSLTCLRLDTASSHIGVWQKRAGSKSDSSWVMTVELGPASSS---------QE
pt008236_POPTR_ CCGKDPSPSLTCLRLDNDNSHIGVWQKKAGSRSSSNWVMKVELGNYNKK-----------
pt005519_POPTR_ CCGKDPSPSLTCLRLDNDNSHIGVWQKKAGSCSSSNWVMRVELGNSNRKSTQVMEELRPS
** *.***********. .********:*** *.*.*** **** . .
AT1G15360.1 TTSKASQDAILAPTTEVEIGGSREEVLDEEEKVALQMIEELLNTN
pt008236_POPTR_ --TESSPTVEIEP----E-NGT-----EEEDRIAMQMIEELLNRN
pt005519_POPTR_ LSSESSSRVEIEP----EINGT-----DEEDKIAMQMIDELLNCN
:::* . : * * .*: :**:::*:***:**** *
BoxShade v3.31 C (beta, 970507) Output
AT1G15360.1 |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
M |
V |
Q |
T |
K |
K |
F |
R |
G |
V |
R |
Q |
R |
H |
W |
G |
S |
W |
V |
A |
E |
I |
R |
H |
P |
L |
L |
K |
R |
R |
I |
W |
L |
G |
T |
F |
E |
T |
A |
E |
E |
A |
A |
R |
pt008236_POPTR_ |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
M |
V |
Q |
S |
K |
K |
F |
R |
G |
V |
R |
Q |
R |
Q |
W |
G |
S |
W |
V |
S |
E |
I |
R |
H |
P |
L |
L |
K |
R |
R |
V |
W |
L |
G |
T |
F |
E |
T |
A |
E |
A |
A |
A |
R |
pt005519_POPTR_ |
M |
I |
L |
I |
C |
S |
S |
V |
F |
L |
S |
F |
L |
S |
Q |
I |
M |
V |
Q |
S |
K |
K |
F |
R |
G |
V |
R |
Q |
R |
Q |
W |
G |
S |
W |
V |
S |
E |
I |
R |
H |
P |
L |
L |
K |
R |
R |
V |
W |
L |
G |
T |
F |
E |
T |
A |
E |
A |
A |
A |
R |
|
AT1G15360.1 |
A |
Y |
D |
E |
A |
A |
V |
L |
M |
S |
G |
R |
N |
A |
K |
T |
N |
F |
P |
L |
N |
N |
N |
N |
T |
G |
E |
T |
S |
E |
G |
K |
T |
D |
I |
S |
A |
S |
S |
T |
M |
S |
S |
S |
T |
S |
S |
S |
S |
L |
S |
S |
I |
L |
S |
A |
K |
L |
R |
K |
pt008236_POPTR_ |
A |
Y |
D |
Q |
A |
A |
I |
L |
M |
N |
G |
Q |
N |
A |
K |
T |
N |
F |
P |
T |
S |
H |
L |
D |
Q |
- |
D |
T |
N |
L |
G |
K |
D |
N |
- |
- |
- |
- |
- |
- |
- |
N |
S |
P |
L |
P |
A |
K |
A |
L |
A |
E |
L |
L |
N |
S |
K |
L |
R |
K |
pt005519_POPTR_ |
A |
Y |
D |
Q |
A |
A |
I |
L |
M |
N |
G |
Q |
N |
A |
K |
T |
N |
F |
P |
A |
S |
H |
L |
D |
Q |
- |
D |
T |
K |
L |
G |
K |
D |
N |
- |
- |
- |
- |
- |
- |
- |
N |
S |
P |
L |
P |
A |
K |
A |
L |
A |
E |
L |
L |
Y |
S |
K |
L |
R |
K |
|
AT1G15360.1 |
C |
C |
- |
K |
S |
P |
S |
P |
S |
L |
T |
C |
L |
R |
L |
D |
T |
A |
S |
S |
H |
I |
G |
V |
W |
Q |
K |
R |
A |
G |
S |
K |
S |
D |
S |
S |
W |
V |
M |
T |
V |
E |
L |
G |
P |
A |
S |
S |
S |
- |
- |
- |
- |
- |
- |
- |
- |
- |
Q |
E |
pt008236_POPTR_ |
C |
C |
G |
K |
D |
P |
S |
P |
S |
L |
T |
C |
L |
R |
L |
D |
N |
D |
N |
S |
H |
I |
G |
V |
W |
Q |
K |
K |
A |
G |
S |
R |
S |
S |
S |
N |
W |
V |
M |
K |
V |
E |
L |
G |
N |
Y |
N |
K |
K |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
pt005519_POPTR_ |
C |
C |
G |
K |
D |
P |
S |
P |
S |
L |
T |
C |
L |
R |
L |
D |
N |
D |
N |
S |
H |
I |
G |
V |
W |
Q |
K |
K |
A |
G |
S |
C |
S |
S |
S |
N |
W |
V |
M |
R |
V |
E |
L |
G |
N |
S |
N |
R |
K |
S |
T |
Q |
V |
M |
E |
E |
L |
R |
P |
S |
|
AT1G15360.1 |
T |
T |
S |
K |
A |
S |
Q |
D |
A |
I |
L |
A |
P |
T |
T |
E |
V |
E |
I |
G |
G |
S |
R |
E |
E |
V |
L |
D |
E |
E |
E |
K |
V |
A |
L |
Q |
M |
I |
E |
E |
L |
L |
N |
T |
N |
pt008236_POPTR_ |
- |
- |
T |
E |
S |
S |
P |
T |
V |
E |
I |
E |
P |
- |
- |
- |
- |
E |
- |
N |
G |
T |
- |
- |
- |
- |
- |
E |
E |
E |
D |
R |
I |
A |
M |
Q |
M |
I |
E |
E |
L |
L |
N |
R |
N |
pt005519_POPTR_ |
L |
S |
S |
E |
S |
S |
S |
R |
V |
E |
I |
E |
P |
- |
- |
- |
- |
E |
I |
N |
G |
T |
- |
- |
- |
- |
- |
D |
E |
E |
D |
K |
I |
A |
M |
Q |
M |
I |
D |
E |
L |
L |
N |
C |
N |
|
|