fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G15360.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt010625 not found in 179aa AT1G15360.1 1st_1st 0.579754601 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G15360.1     MVQTKKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKT
pt010625_POPTR_ MVQSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFDTAEEAARAYDEAAILMSGRNAKT
                ***:***************:**********:*****:*************:*********

AT1G15360.1     NFPLNNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKCCKSPSPSLTCLRLDT
pt010625_POPTR_ NFPVVANQT----------------RNGQNSPSSSSALSAKLRKYCRSPYPSLTCLRLDA
                ***:  *:*                 .. .*.* ** ******* *:** *********:

AT1G15360.1     ASSHIGVWQKRAGSKSDSSWVMTVELGPASSSQETTSKASQDAILAPTTEV--EIGGSRE
pt010625_POPTR_ ENCHIGVWQKRAGPRSVSNWIMTVELGKKDGRQ----APEQKILISDTSDMAGQEGGS-D
                 ..**********.:* *.*:******  .. *     ..*. ::: *:::  : *** :

AT1G15360.1     EVLDEEEKVALQMIEELLNTN
pt010625_POPTR_ DGPDDEERVALQMIEELLNR-
                :  *:**:***********
BoxShade v3.31 C (beta, 970507) Output
AT1G15360.1     M V Q T K K F R G V R Q R H W G S W V A E I R H P L L K R R I W L G T F E T A E E A A R A Y D E A A V L M S G R N A K T
pt010625_POPTR_    M V Q S K K F R G V R Q R H W G S W V S E I R H P L L K R R V W L G T F D T A E E A A R A Y D E A A I L M S G R N A K T
 
AT1G15360.1     N F P L N N N N T G E T S E G K T D I S A S S T M S S S T S S S S L S S I L S A K L R K C C K S P S P S L T C L R L D T
pt010625_POPTR_    N F P V V A N Q T - - - - - - - - - - - - - - - - R N G Q N S P S S S S A L S A K L R K Y C R S P Y P S L T C L R L D A
 
AT1G15360.1     A S S H I G V W Q K R A G S K S D S S W V M T V E L G P A S S S Q E T T S K A S Q D A I L A P T T E V - - E I G G S R E
pt010625_POPTR_    E N C H I G V W Q K R A G P R S V S N W I M T V E L G K K D G R Q - - - - A P E Q K I L I S D T S D M A G Q E G G S - D
 
AT1G15360.1     E V L D E E E K V A L Q M I E E L L N T N
pt010625_POPTR_    D G P D D E E R V A L Q M I E E L L N R -
 
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