fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G15360.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb003993 not found in 235aa AT1G15360.1 not_1st 0.588957055 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G15360.1     MVQT-KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAK
Sb003993_Sorbi1 MVQSKKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDEAAVLMSGRNAK
                ***: ***************:**********:****************************

AT1G15360.1     TNFPLNNNNTGETS--EGKTDI-----SASSTMSSSTSSSSLSSILSAKLRKCCKSPSPS
Sb003993_Sorbi1 TNFPVPRTATGELAPVPAARDARGGGGSSSAAAAPGGGTSNLSQILSAKLRKCCKTPSPS
                ****: .. *** :   .  *      *:*:: :.. .:*.**.***********:****

AT1G15360.1     LTCLRLDTASSHIGVWQKRAGSKSDSSWVMTVELG-----PASSS-QETTSKASQDAILA
Sb003993_Sorbi1 LTCLRLDPEKSHIGVWQKRAGARADSSWVMTVQLNKDVPPPASSSGEEPVPSDGGAAATT
                *******. .***********:::********:*.     ***** :*.... .  *  :

AT1G15360.1     PT-----TEVEIGGSREE--VLDEEEKVALQMIEELLNTN---------------
Sb003993_Sorbi1 PTSTSTSSTVTTTGSPPPAMMMDDEERIALQMIEELLGSSHSHGMFQGAAGSIVI
                **     : *   **     ::*:**::*********.:.
BoxShade v3.31 C (beta, 970507) Output
AT1G15360.1     M V Q T - K K F R G V R Q R H W G S W V A E I R H P L L K R R I W L G T F E T A E E A A R A Y D E A A V L M S G R N A K
Sb003993_Sorbi1    M V Q S K K K F R G V R Q R H W G S W V S E I R H P L L K R R V W L G T F E T A E E A A R A Y D E A A V L M S G R N A K
 
AT1G15360.1     T N F P L N N N N T G E T S - - E G K T D I - - - - - S A S S T M S S S T S S S S L S S I L S A K L R K C C K S P S P S
Sb003993_Sorbi1    T N F P V P R T A T G E L A P V P A A R D A R G G G G S S S A A A A P G G G T S N L S Q I L S A K L R K C C K T P S P S
 
AT1G15360.1     L T C L R L D T A S S H I G V W Q K R A G S K S D S S W V M T V E L G - - - - - P A S S S - Q E T T S K A S Q D A I L A
Sb003993_Sorbi1    L T C L R L D P E K S H I G V W Q K R A G A R A D S S W V M T V Q L N K D V P P P A S S S G E E P V P S D G G A A A T T
 
AT1G15360.1     P T - - - - - T E V E I G G S R E E - - V L D E E E K V A L Q M I E E L L N T N - - - - - - - - - - - - - - -
Sb003993_Sorbi1    P T S T S T S S T V T T T G S P P P A M M M D D E E R I A L Q M I E E L L G S S H S H G M F Q G A A G S I V I
 
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