fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G15360.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb009863 not found in 204aa AT1G15360.1 1st_1st 0.634969325 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G15360.1     MVQTKKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKT
Sb009863_Sorbi1 MVQPKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDEAAVLMSGRNAKT
                ***.***************:**********:*****************************

AT1G15360.1     NFPLNNNNTGE-TSEGKTDISASSTMSSSTSSSSLSSILSAKLRKCCKSPSPSLTCLRLD
Sb009863_Sorbi1 NFPVQRSSTGEPTPAAGRD--AHSNAGSGSSTANLSQILSAKLRKCCKAPSPSLTCLRLD
                ***::...*** *. .  *  * *. .*.:*::.**.***********:***********

AT1G15360.1     TASSHIGVWQKRAGSKSDSSWVMTVELGPASSSQETTSKASQDAILAPTTEVEIGGSREE
Sb009863_Sorbi1 PEKSHIGVWQKRAGARADSNWVMTVELNKGAASTDAASQSTSATTAPPATP---------
                . .***********:::**.*******. .::* :::*:::. :  .*:*          

AT1G15360.1     VLDEEEKVALQMIEELLNTN----------------
Sb009863_Sorbi1 -MDDEERIALQMIEELLSSSSPASPSHGDDQGRFII
                 :*:**::*********.:.
BoxShade v3.31 C (beta, 970507) Output
AT1G15360.1     M V Q T K K F R G V R Q R H W G S W V A E I R H P L L K R R I W L G T F E T A E E A A R A Y D E A A V L M S G R N A K T
Sb009863_Sorbi1    M V Q P K K F R G V R Q R H W G S W V S E I R H P L L K R R V W L G T F E T A E E A A R A Y D E A A V L M S G R N A K T
 
AT1G15360.1     N F P L N N N N T G E - T S E G K T D I S A S S T M S S S T S S S S L S S I L S A K L R K C C K S P S P S L T C L R L D
Sb009863_Sorbi1    N F P V Q R S S T G E P T P A A G R D - - A H S N A G S G S S T A N L S Q I L S A K L R K C C K A P S P S L T C L R L D
 
AT1G15360.1     T A S S H I G V W Q K R A G S K S D S S W V M T V E L G P A S S S Q E T T S K A S Q D A I L A P T T E V E I G G S R E E
Sb009863_Sorbi1    P E K S H I G V W Q K R A G A R A D S N W V M T V E L N K G A A S T D A A S Q S T S A T T A P P A T P - - - - - - - - -
 
AT1G15360.1     V L D E E E K V A L Q M I E E L L N T N - - - - - - - - - - - - - - - -
Sb009863_Sorbi1    - M D D E E R I A L Q M I E E L L S S S S P A S P S H G D D Q G R F I I
 
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