fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G15360.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb009863 not found in 204aa AT1G15360.1 1st_1st 0.634969325 Ia
Sb003993 not found in 235aa AT1G15360.1 not_1st 0.588957055 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G15360.1     MVQT-KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAK
Sb003993_Sorbi1 MVQSKKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDEAAVLMSGRNAK
Sb009863_Sorbi1 MVQP-KKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDEAAVLMSGRNAK
                ***. ***************:**********:****************************

AT1G15360.1     TNFPLNNNNTGE---TSEGKTDISASSTMSS-----STSSSSLSSILSAKLRKCCKSPSP
Sb003993_Sorbi1 TNFPVPRTATGELAPVPAA-RDARGGGGSSSAAAAPGGGTSNLSQILSAKLRKCCKTPSP
Sb009863_Sorbi1 TNFPVQRSSTGE--PTPAAGRDAHSNAGS-------GSSTANLSQILSAKLRKCCKAPSP
                ****: .. ***   .. .  *  ...         . .::.**.***********:***

AT1G15360.1     SLTCLRLDTASSHIGVWQKRAGSKSDSSWVMTVEL--------------------GPASS
Sb003993_Sorbi1 SLTCLRLDPEKSHIGVWQKRAGARADSSWVMTVQLNKDVPPPASSSGEEPVPSDGGAAAT
Sb009863_Sorbi1 SLTCLRLDPEKSHIGVWQKRAGARADSNWVMTVELNK------------------GAAST
                ********. .***********:::**.*****:*                    *.*::

AT1G15360.1     SQETTSKASQ---DAILAPTTEVEIGGSREEVLDEEEKVALQMIEELLNTN---------
Sb003993_Sorbi1 TPTSTSTSSTVTTTGSPPPAM----------MMDDEERIALQMIEELLGSSH----SHGM
Sb009863_Sorbi1 DAASQSTSAT-----TAPPAT----------PMDDEERIALQMIEELLSSSSPASPSHGD
                   : *.::        .*:            :*:**::*********.:.         

AT1G15360.1     ----------
Sb003993_Sorbi1 FQGAAGSIVI
Sb009863_Sorbi1 DQ---GRFII
BoxShade v3.31 C (beta, 970507) Output
AT1G15360.1     M V Q T - K K F R G V R Q R H W G S W V A E I R H P L L K R R I W L G T F E T A E E A A R A Y D E A A V L M S G R N A K
Sb003993_Sorbi1    M V Q S K K K F R G V R Q R H W G S W V S E I R H P L L K R R V W L G T F E T A E E A A R A Y D E A A V L M S G R N A K
Sb009863_Sorbi1    M V Q P - K K F R G V R Q R H W G S W V S E I R H P L L K R R V W L G T F E T A E E A A R A Y D E A A V L M S G R N A K
 
AT1G15360.1     T N F P L N N N N T G E - - - T S E G K T D I S A S S T M S S - - - - - S T S S S S L S S I L S A K L R K C C K S P S P
Sb003993_Sorbi1    T N F P V P R T A T G E L A P V P A A - R D A R G G G G S S S A A A A P G G G T S N L S Q I L S A K L R K C C K T P S P
Sb009863_Sorbi1    T N F P V Q R S S T G E - - P T P A A G R D A H S N A G S - - - - - - - G S S T A N L S Q I L S A K L R K C C K A P S P
 
AT1G15360.1     S L T C L R L D T A S S H I G V W Q K R A G S K S D S S W V M T V E L - - - - - - - - - - - - - - - - - - - - G P A S S
Sb003993_Sorbi1    S L T C L R L D P E K S H I G V W Q K R A G A R A D S S W V M T V Q L N K D V P P P A S S S G E E P V P S D G G A A A T
Sb009863_Sorbi1    S L T C L R L D P E K S H I G V W Q K R A G A R A D S N W V M T V E L N K - - - - - - - - - - - - - - - - - - G A A S T
 
AT1G15360.1     S Q E T T S K A S Q - - - D A I L A P T T E V E I G G S R E E V L D E E E K V A L Q M I E E L L N T N - - - - - - - - -
Sb003993_Sorbi1    T P T S T S T S S T V T T T G S P P P A M - - - - - - - - - - M M D D E E R I A L Q M I E E L L G S S H - - - - S H G M
Sb009863_Sorbi1    D A A S Q S T S A T - - - - - T A P P A T - - - - - - - - - - P M D D E E R I A L Q M I E E L L S S S S P A S P S H G D
 
AT1G15360.1     - - - - - - - - - -
Sb003993_Sorbi1    F Q G A A G S I V I
Sb009863_Sorbi1    D Q - - - G R F I I
 
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