fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G15360.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm014342 not found in 185aa AT5G11190.1 not_not 0.564417177 III
Gm014341 not found in 185aa AT5G11190.1 not_not 0.564417177 III
Gm047682 not found in 199aa AT5G11190.1 not_not 0.555214723 III
Gm009134 not found in 173aa AT5G11190.1 not_not 0.539877300 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G15360.1     MVQTKKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKT
gm014342_Glyma0 MVQTKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKT
gm009134_Glyma0 MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKT
gm047682_Glyma1 MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMSGQNAKT
gm014341_Glyma0 MVQTKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKT
                ***:*********:*****:**********:********* ******:**:**.*:****

AT1G15360.1     NFPLNNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKCCKSPSPSLTCLRLDT
gm014342_Glyma0 NFPTSKNQ----AEADDNNN----TDTFLSPKALSELLSTKLRKYCKDPAPSLTCLRLDA
gm009134_Glyma0 NFPTSKNQ----AEADHDNN-----NTFLSPKALSELLSTKLRKYCKDPAPSLTCLRLDA
gm047682_Glyma1 NFPTQMNQ----PQGATTTTP--CVDPFSSPNVLSEHLSRKLKRCCKDPSPSLTCLRLDA
gm014341_Glyma0 NFPTSKNQ----AEADDNNN----TDTFLSPKALSELLSTKLRKYCKDPAPSLTCLRLDA
                *** . *:    .:.    .     ..  *.. **. ** **:: **.*:*********:

AT1G15360.1     ASSHIGVWQKRAGSKSDSSWVMTVELGPASSSQE--TTSKASQDAILAPTTEVEIGGSRE
gm014342_Glyma0 DNSHIGVWQKGAGPHSGSNWVMRLELGKKQITEEGSESTESPQSSTNGATENNEV-----
gm009134_Glyma0 DNSHIGVWQKGAGPHSGSNWVMRVELGKKQIITE-----------VEVEVEVEEE-----
gm047682_Glyma1 DNSHIGVWQKGAGPHSDSNWIVRVEIGKK-LHAEG-ESSSVSSSAAGGSPPKPSVGHG-D
gm014341_Glyma0 DNSHIGVWQKGAGPHSGSNWVMRLELGKKQITEEGSESTESPQSSTNGATENNEV-----
                 .******** **.:*.*.*:: :*:*      *                   .      

AT1G15360.1     EVLDEEEKVALQMIEELLNTN-------
gm014342_Glyma0 ---EEEDRVALQMIEELLNWN-------
gm009134_Glyma0 ---EEEDRVALQMIEELLNWN-------
gm047682_Glyma1 GYGDEEDRIAMQMIDELLNWNHPCGSSN
gm014341_Glyma0 ---EEEDRVALQMIEELLNWN-------
                   :**:::*:***:**** *
BoxShade v3.31 C (beta, 970507) Output
AT1G15360.1     M V Q T K K F R G V R Q R H W G S W V A E I R H P L L K R R I W L G T F E T A E E A A R A Y D E A A V L M S G R N A K T
gm014342_Glyma0    M V Q T K K F R G V R Q R Q W G S W V S E I R H P L L K R R V W L G T F E T A E A A A R A Y D Q A A I L M N G Q N A K T
gm009134_Glyma0    M V Q A K K F R G V R Q R Q W G S W V S E I R H P L L K R R V W L G T F E T A E A A A R A Y D Q A A I L M N G Q N A K T
gm047682_Glyma1    M V Q A K K F R G V R Q R Q W G S W V S E I R H P L L K R R V W L G T F E T A E A A A R A Y D Q A A I L M S G Q N A K T
gm014341_Glyma0    M V Q T K K F R G V R Q R Q W G S W V S E I R H P L L K R R V W L G T F E T A E A A A R A Y D Q A A I L M N G Q N A K T
 
AT1G15360.1     N F P L N N N N T G E T S E G K T D I S A S S T M S S S T S S S S L S S I L S A K L R K C C K S P S P S L T C L R L D T
gm014342_Glyma0    N F P T S K N Q - - - - A E A D D N N N - - - - T D T F L S P K A L S E L L S T K L R K Y C K D P A P S L T C L R L D A
gm009134_Glyma0    N F P T S K N Q - - - - A E A D H D N N - - - - - N T F L S P K A L S E L L S T K L R K Y C K D P A P S L T C L R L D A
gm047682_Glyma1    N F P T Q M N Q - - - - P Q G A T T T T P - - C V D P F S S P N V L S E H L S R K L K R C C K D P S P S L T C L R L D A
gm014341_Glyma0    N F P T S K N Q - - - - A E A D D N N N - - - - T D T F L S P K A L S E L L S T K L R K Y C K D P A P S L T C L R L D A
 
AT1G15360.1     A S S H I G V W Q K R A G S K S D S S W V M T V E L G P A S S S Q E - - T T S K A S Q D A I L A P T T E V E I G G S R E
gm014342_Glyma0    D N S H I G V W Q K G A G P H S G S N W V M R L E L G K K Q I T E E G S E S T E S P Q S S T N G A T E N N E V - - - - -
gm009134_Glyma0    D N S H I G V W Q K G A G P H S G S N W V M R V E L G K K Q I I T E - - - - - - - - - - - V E V E V E V E E E - - - - -
gm047682_Glyma1    D N S H I G V W Q K G A G P H S D S N W I V R V E I G K K - L H A E G - E S S S V S S S A A G G S P P K P S V G H G - D
gm014341_Glyma0    D N S H I G V W Q K G A G P H S G S N W V M R L E L G K K Q I T E E G S E S T E S P Q S S T N G A T E N N E V - - - - -
 
AT1G15360.1     E V L D E E E K V A L Q M I E E L L N T N - - - - - - -
gm014342_Glyma0    - - - E E E D R V A L Q M I E E L L N W N - - - - - - -
gm009134_Glyma0    - - - E E E D R V A L Q M I E E L L N W N - - - - - - -
gm047682_Glyma1    G Y G D E E D R I A M Q M I D E L L N W N H P C G S S N
gm014341_Glyma0    - - - E E E D R V A L Q M I E E L L N W N - - - - - - -
 
0