fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G15360.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm017279 not found in 189aa AT1G15360.1 1st_1st 0.625766871 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G15360.1     MVQTKKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKT
gm017279_Glyma0 MVQSRKFRGVRQRNWGSWVSEIRHPLLKRRVWLGTFETADEAARAYDEAAILMSGRNAKT
                ***::********:*****:**********:********:**********:*********

AT1G15360.1     NFPLNNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKCCKSPSPSLTCLRLDT
gm017279_Glyma0 NFPVGENQMGNHS--------SSTSSSST--TTLSAVLSAKLRKCCKSPSPSLTCLRLDT
                ***:.:*: *: *        *** ****  ::**::***********************

AT1G15360.1     ASSHIGVWQKRAGSKSDSSWVMTVEL------GPASSSQETTSKASQDAILAPTTEVEIG
gm017279_Glyma0 ENSHIGVWQKRAGPRSDSNWIMMVELEKKNNKGPSSESELPVVVVDDDAPEKVKPEESTG
                 .***********.:***.*:* ***      **:*.*: ..  ..:**    ..* . *

AT1G15360.1     GSREEVLDEEEKVALQMIEELLNTN
gm017279_Glyma0 ------LDEEQKMALQMIEELLNRN
                      ****:*:********** *
BoxShade v3.31 C (beta, 970507) Output
AT1G15360.1     M V Q T K K F R G V R Q R H W G S W V A E I R H P L L K R R I W L G T F E T A E E A A R A Y D E A A V L M S G R N A K T
gm017279_Glyma0    M V Q S R K F R G V R Q R N W G S W V S E I R H P L L K R R V W L G T F E T A D E A A R A Y D E A A I L M S G R N A K T
 
AT1G15360.1     N F P L N N N N T G E T S E G K T D I S A S S T M S S S T S S S S L S S I L S A K L R K C C K S P S P S L T C L R L D T
gm017279_Glyma0    N F P V G E N Q M G N H S - - - - - - - - S S T S S S S T - - T T L S A V L S A K L R K C C K S P S P S L T C L R L D T
 
AT1G15360.1     A S S H I G V W Q K R A G S K S D S S W V M T V E L - - - - - - G P A S S S Q E T T S K A S Q D A I L A P T T E V E I G
gm017279_Glyma0    E N S H I G V W Q K R A G P R S D S N W I M M V E L E K K N N K G P S S E S E L P V V V V D D D A P E K V K P E E S T G
 
AT1G15360.1     G S R E E V L D E E E K V A L Q M I E E L L N T N
gm017279_Glyma0    - - - - - - L D E E Q K M A L Q M I E E L L N R N
 
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