fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G15580.1 GLEITELRLGLPGDIV at 13/163 in AT1G15580.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt028706 not found in 189aa AT3G15540.1 1st_not 0.491071428 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G15580.1     MANESNNLGLEITELRLGLPGDIVVSGESISGKKRASPEVEIDLKCEP---------AKK
pt028706_POPTR_ MAQP---LGLEITELRLGPPG-------SENGPKNEKKRVFSELSGEANSTTDGRKTQTT
                **:    *********** **       * .* *. . .*  :*. *.          ..

AT1G15580.1     SQVVGWPPVCSYRRKNSL-----ERTKSSYVKVSVDGAAFLRKIDLEMYKCYQDLASALQ
pt028706_POPTR_ SQVVGWPPVCSYRKKNSFNEKDSHETSKIYVKVSMDGAPFLRKVDLGMHKEYSDLVVALE
                *************:***:     ..*.. *****:***.****:** *:* *.**. **:

AT1G15580.1     ILFGCYINFDDTLKES---ECVPIYEDKDGDWMLAGDVPWEMFLGSCKRLRIMKRSCNRG
pt028706_POPTR_ KLFGCF-GIGKALKDTDDCEYVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMKRSEAKG
                 ****: .:..:**::   * *************.********: ***********  :*

AT1G15580.1     --------------------
pt028706_POPTR_ FGLQPRGALQQGNISKDDRD
BoxShade v3.31 C (beta, 970507) Output
AT1G15580.1     M A N E S N N L G L E I T E L R L G L P G D I V V S G E S I S G K K R A S P E V E I D L K C E P - - - - - - - - - A K K
pt028706_POPTR_    M A Q P - - - L G L E I T E L R L G P P G - - - - - - - S E N G P K N E K K R V F S E L S G E A N S T T D G R K T Q T T
 
AT1G15580.1     S Q V V G W P P V C S Y R R K N S L - - - - - E R T K S S Y V K V S V D G A A F L R K I D L E M Y K C Y Q D L A S A L Q
pt028706_POPTR_    S Q V V G W P P V C S Y R K K N S F N E K D S H E T S K I Y V K V S M D G A P F L R K V D L G M H K E Y S D L V V A L E
 
AT1G15580.1     I L F G C Y I N F D D T L K E S - - - E C V P I Y E D K D G D W M L A G D V P W E M F L G S C K R L R I M K R S C N R G
pt028706_POPTR_    K L F G C F - G I G K A L K D T D D C E Y V P I Y E D K D G D W M L V G D V P W E M F I E S C K R L R I M K R S E A K G
 
AT1G15580.1     - - - - - - - - - - - - - - - - - - - -
pt028706_POPTR_    F G L Q P R G A L Q Q G N I S K D D R D
 
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