fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G15580.1 GLEITELRLGLPGDIV at 13/163 in AT1G15580.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm017314 GLEITELRLGLPDAEH in 12/187 AT3G15540.1 1st_not 0.523809523 II
HKGYSDLALALDKLFG in 104/187
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G15580.1     MANESNNLGLEITELRLGLPGDIVVSGESISGKKRASPEVEI-------DLKCEPAKKSQ
gm017314_Glyma0 MAKEG--LGLEITELRLGLPDAEHVTVVNKNEKKRAFSQIDDENSSSGGDRKIK-TNKSQ
                **:*.  *************.   *:  . . **** .:::        * * : ::***

AT1G15580.1     VVGWPPVCSYRRKNSLERTKSSYVKVSVDGAAFLRKIDLEMYKCYQDLASALQILFGCYI
gm017314_Glyma0 VVGWPPVCSYRKKNSMNEGSKMYVKVSMDGAPFLRKIDLGLHKGYSDLALALDKLFGSY-
                ***********:***::. .. *****:***.******* ::* *.*** **: ***.* 

AT1G15580.1     NFDDTLK---ESECVPIYEDKDGDWMLAGDVPWEMFLGSCKRLRIMKRSCNRG-------
gm017314_Glyma0 GMVEALKNADNSEHVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRSDAKGFGLQPKG
                .: ::**   :** *************.********: ***********  :*       

AT1G15580.1     -----------
gm017314_Glyma0 SLKGFIESAAK
BoxShade v3.31 C (beta, 970507) Output
AT1G15580.1     M A N E S N N L G L E I T E L R L G L P G D I V V S G E S I S G K K R A S P E V E I - - - - - - - D L K C E P A K K S Q
gm017314_Glyma0    M A K E G - - L G L E I T E L R L G L P D A E H V T V V N K N E K K R A F S Q I D D E N S S S G G D R K I K - T N K S Q
 
AT1G15580.1     V V G W P P V C S Y R R K N S L E R T K S S Y V K V S V D G A A F L R K I D L E M Y K C Y Q D L A S A L Q I L F G C Y I
gm017314_Glyma0    V V G W P P V C S Y R K K N S M N E G S K M Y V K V S M D G A P F L R K I D L G L H K G Y S D L A L A L D K L F G S Y -
 
AT1G15580.1     N F D D T L K - - - E S E C V P I Y E D K D G D W M L A G D V P W E M F L G S C K R L R I M K R S C N R G - - - - - - -
gm017314_Glyma0    G M V E A L K N A D N S E H V P I Y E D K D G D W M L V G D V P W E M F M E S C K R L R I M K R S D A K G F G L Q P K G
 
AT1G15580.1     - - - - - - - - - - -
gm017314_Glyma0    S L K G F I E S A A K
 
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