fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G16060.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt011493 not found in 354aa AT1G16060.1 1st_not 0.562929061 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G16060.2     ---------------------------------------MFFFLVLLTM---LTG-----
pt011493_POPTR_ MGKTSKQSLKNSANTSINPATKVKRTRKSVPRDSPPQRSSIYNHILFSLKHRWTGRYEAH
                                                        ::  :*:::    **     

AT1G16060.2     ---------IMADSSRAVYLGAYDEEDAAARAYDLAALKYWGRDTILNFPLCNYEEDIKE
pt011493_POPTR_ LWDKNCWNESQNKKGRQVYLGAYDDEEAAGHAYDLAALKYWGQDTILNFPLSTYEEEFKE
                            ...* *******:*:**.:***********:********..***::**

AT1G16060.2     MESQSKEEYIGSLRRKSSGFSRGVSKYRGVAKHHHNGRWEARIGRVFGNKYLYLGTYATQ
pt011493_POPTR_ MEGHSKEEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQ
                **.:***************************:****************************

AT1G16060.2     EEAAIAYDIAAIEYRGLNAVTNFDISRYLKLPVPENPIDTANNLLESPHSDLSPFIK---
pt011493_POPTR_ EEAATAYDMAAIEYRGLNAVTNFDLSRYVKWLRPNNQ-NNINNPQQNPNGDANIPIQNLD
                **** ***:***************:***:*   *:*  :. **  :.*:.* .  *:   

AT1G16060.2     PNHESDLSQSQSSSEDNDDRKTKLLKSSPL----VAEEVIG-------------------
pt011493_POPTR_ QKLELDFISHQQSSKVND---TEVAPTRPCGAGGSASSALGLLLQSSKFKEMLERTSASD
                 : * *: . *.**: **   *::  : *      *...:*                   

AT1G16060.2     -PSTPPEI--APPRRSFPEDIQTYFGCQNSGKLTAEEDDVIFGDLDSFLTPDFYSELNDC
pt011493_POPTR_ CPLTPPESDRDPPRRSFPDDIQTYFDCQDSSSYT-DGDDIIFGDLHSFASPIFHCELDG-
                 * ****    *******:******.**:*.. * : **:*****.** :* *:.**:.
BoxShade v3.31 C (beta, 970507) Output
AT1G16060.2     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M F F F L V L L T M - - - L T G - - - - -
pt011493_POPTR_    M G K T S K Q S L K N S A N T S I N P A T K V K R T R K S V P R D S P P Q R S S I Y N H I L F S L K H R W T G R Y E A H
 
AT1G16060.2     - - - - - - - - - I M A D S S R A V Y L G A Y D E E D A A A R A Y D L A A L K Y W G R D T I L N F P L C N Y E E D I K E
pt011493_POPTR_    L W D K N C W N E S Q N K K G R Q V Y L G A Y D D E E A A G H A Y D L A A L K Y W G Q D T I L N F P L S T Y E E E F K E
 
AT1G16060.2     M E S Q S K E E Y I G S L R R K S S G F S R G V S K Y R G V A K H H H N G R W E A R I G R V F G N K Y L Y L G T Y A T Q
pt011493_POPTR_    M E G H S K E E Y I G S L R R K S S G F S R G V S K Y R G V A R H H H N G R W E A R I G R V F G N K Y L Y L G T Y A T Q
 
AT1G16060.2     E E A A I A Y D I A A I E Y R G L N A V T N F D I S R Y L K L P V P E N P I D T A N N L L E S P H S D L S P F I K - - -
pt011493_POPTR_    E E A A T A Y D M A A I E Y R G L N A V T N F D L S R Y V K W L R P N N Q - N N I N N P Q Q N P N G D A N I P I Q N L D
 
AT1G16060.2     P N H E S D L S Q S Q S S S E D N D D R K T K L L K S S P L - - - - V A E E V I G - - - - - - - - - - - - - - - - - - -
pt011493_POPTR_    Q K L E L D F I S H Q Q S S K V N D - - - T E V A P T R P C G A G G S A S S A L G L L L Q S S K F K E M L E R T S A S D
 
AT1G16060.2     - P S T P P E I - - A P P R R S F P E D I Q T Y F G C Q N S G K L T A E E D D V I F G D L D S F L T P D F Y S E L N D C
pt011493_POPTR_    C P L T P P E S D R D P P R R S F P D D I Q T Y F D C Q D S S S Y T - D G D D I I F G D L H S F A S P I F H C E L D G -
 
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