fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G16060.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt029433 not found in 374aa AT1G16060.1 not_not 0.540045766 III
Pt009075 not found in 353aa AT1G16060.1 not_not 0.498855835 III
Pt005285 not found in 305aa AT1G16060.1 not_not 0.416475972 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G16060.2     MFFFLVLLTMLTGIMADSS-----------------------------------------
pt005285_POPTR_ --------------MAKLSQQNTKNTAINRNNTTNGVTKVKRTRRSVPRDSPPQRSSIYR
pt009075_POPTR_ --------------MAKLSQKNTKNTASNNNNTTNGVTKVKRTRRSVPRDSPPQRSSIYR
pt029433_POPTR_ --------------MGKTSKQSLKDTA---NTSTNPTNKVKRTRKTVPRDSPPQRSSIYR
                              *.. *                                         

AT1G16060.2     -----------------------------RAVYLGAYDEEDAAARAYDLAALKYWGRDTI
pt005285_POPTR_ GVTRHRWTGRYEAHLWDKNCWNESQNKKGRQ---GAYDDEEVAAHAYDLAALKYWGPETI
pt009075_POPTR_ GVTRHRWTGRYEAHLWDKNCWNESQNKKGRQ---GAYDDEEAAAHAYDLAALKYWGPETI
pt029433_POPTR_ GVTRHRWTGRYEAHLWDKNSWNESQNKKGRQVYLGAYDDEEAAAHAYDLAALKYWGQDTI
                                             *    ****:*:.**:*********** :**

AT1G16060.2     LNFPLCNYEEDIKEMESQSKEEYIGSLRRKSSGFSRGVSKYRGVAKHHHNGRWEARIGRV
pt005285_POPTR_ LNFPLSTYQNQLKEMEGRSREEYIGSLRRKS---SRGVPKYRGVSRHHHNGGWEARIGRV
pt009075_POPTR_ LNFPLSTYQNELKEMEGQSREECIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRV
pt029433_POPTR_ LNFPWSTYKEELKEMEGQSKEEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRV
                **** ..*::::****.:*:** ********   ****.*****::***** ********

AT1G16060.2     FGNKYLYLGTYATQEEAAIAYDIAAIEYRGLNAVTNFDISRYLKLPVPENPIDTANNLLE
pt005285_POPTR_ FGNKYLYPGTYATQEEAAAAY---GIEHRGLNA----DLSRYIKWLKPNQNNSNGSNDLN
pt009075_POPTR_ FGNKYLYLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWLKPNQNNTDNNNGLD
pt029433_POPTR_ FGNKYLYLGTYATQEEAATAYDMAAIEYRGINAVTNFDLSRYIKWLRPN-NHNNVNNPQQ
                ******* ********** **   .**:**:**    *:***:*   *:      .*  :

AT1G16060.2     SPHSDLSP-----------FIKPNHESDLSQSQSSSED--NDDRKTK-------------
pt005285_POPTR_ LP----NPM-------------------IIGTDNSTHP----------------------
pt009075_POPTR_ LP----NP--------------------IIGTDNSTHPNPNQELGTTFLQINQQTYQPSE
pt029433_POPTR_ NPNCDANPIQNLDQKIELDFMPHQQSSNVNGTEELTDP--ARSGGT--------------
                 *    .*                    :  ::. :.                       

AT1G16060.2     ------------------LLKSSPL--VAEEVIGPSTPPE-----------IAPPRRSFP
pt005285_POPTR_ ---------------LGLLLQSSKFKEMMEMTAVTDCPPT-------SSSDLELTPCSFP
pt009075_POPTR_ TTLTQPRPATNPSSALGLLLQSSKFKEMMEMTAVADCPPT-------PPSGLDPTPCSFL
pt029433_POPTR_ --------GGSASSALGLLLQSSKFKEILERTSAADCPLTPLPPLTPPESDRDPPRRSFP
                                  **:** :  : * .  .. *                .  ** 

AT1G16060.2     EDIQTYFGCQNSGKLTAEEDDVIFGDLDSFLTPDFYSELNDC--------------
pt005285_POPTR_ EDVQTYFECQYSSSYGDQGDDMIFGDYNSFMPPMFHSDF-----------------
pt009075_POPTR_ EDVQTYFDCLDSSNYGDQGDDMIFGDLNSFVPPMFQCDFET---------------
pt029433_POPTR_ DDIQTVFDCQDSSSYTDDDDINIFGELNPFASPIFHYELDGQEMVFGPNKSNILTT
                :*:** * *  *..   : *  ***: :.* .* *  ::
BoxShade v3.31 C (beta, 970507) Output
AT1G16060.2     M F F F L V L L T M L T G I M A D S S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt005285_POPTR_    - - - - - - - - - - - - - - M A K L S Q Q N T K N T A I N R N N T T N G V T K V K R T R R S V P R D S P P Q R S S I Y R
pt009075_POPTR_    - - - - - - - - - - - - - - M A K L S Q K N T K N T A S N N N N T T N G V T K V K R T R R S V P R D S P P Q R S S I Y R
pt029433_POPTR_    - - - - - - - - - - - - - - M G K T S K Q S L K D T A - - - N T S T N P T N K V K R T R K T V P R D S P P Q R S S I Y R
 
AT1G16060.2     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - R A V Y L G A Y D E E D A A A R A Y D L A A L K Y W G R D T I
pt005285_POPTR_    G V T R H R W T G R Y E A H L W D K N C W N E S Q N K K G R Q - - - G A Y D D E E V A A H A Y D L A A L K Y W G P E T I
pt009075_POPTR_    G V T R H R W T G R Y E A H L W D K N C W N E S Q N K K G R Q - - - G A Y D D E E A A A H A Y D L A A L K Y W G P E T I
pt029433_POPTR_    G V T R H R W T G R Y E A H L W D K N S W N E S Q N K K G R Q V Y L G A Y D D E E A A A H A Y D L A A L K Y W G Q D T I
 
AT1G16060.2     L N F P L C N Y E E D I K E M E S Q S K E E Y I G S L R R K S S G F S R G V S K Y R G V A K H H H N G R W E A R I G R V
pt005285_POPTR_    L N F P L S T Y Q N Q L K E M E G R S R E E Y I G S L R R K S - - - S R G V P K Y R G V S R H H H N G G W E A R I G R V
pt009075_POPTR_    L N F P L S T Y Q N E L K E M E G Q S R E E C I G S L R R K S S G F S R G V S K Y R G V A R H H H N G R W E A R I G R V
pt029433_POPTR_    L N F P W S T Y K E E L K E M E G Q S K E E Y I G S L R R K S S G F S R G V S K Y R G V A R H H H N G R W E A R I G R V
 
AT1G16060.2     F G N K Y L Y L G T Y A T Q E E A A I A Y D I A A I E Y R G L N A V T N F D I S R Y L K L P V P E N P I D T A N N L L E
pt005285_POPTR_    F G N K Y L Y P G T Y A T Q E E A A A A Y - - - G I E H R G L N A - - - - D L S R Y I K W L K P N Q N N S N G S N D L N
pt009075_POPTR_    F G N K Y L Y L G T Y A T Q E E A A T A Y D M A A I E Y R G L N A V T N F D L S R Y I K W L K P N Q N N T D N N N G L D
pt029433_POPTR_    F G N K Y L Y L G T Y A T Q E E A A T A Y D M A A I E Y R G I N A V T N F D L S R Y I K W L R P N - N H N N V N N P Q Q
 
AT1G16060.2     S P H S D L S P - - - - - - - - - - - F I K P N H E S D L S Q S Q S S S E D - - N D D R K T K - - - - - - - - - - - - -
pt005285_POPTR_    L P - - - - N P M - - - - - - - - - - - - - - - - - - - I I G T D N S T H P - - - - - - - - - - - - - - - - - - - - - -
pt009075_POPTR_    L P - - - - N P - - - - - - - - - - - - - - - - - - - - I I G T D N S T H P N P N Q E L G T T F L Q I N Q Q T Y Q P S E
pt029433_POPTR_    N P N C D A N P I Q N L D Q K I E L D F M P H Q Q S S N V N G T E E L T D P - - A R S G G T - - - - - - - - - - - - - -
 
AT1G16060.2     - - - - - - - - - - - - - - - - - - L L K S S P L - - V A E E V I G P S T P P E - - - - - - - - - - - I A P P R R S F P
pt005285_POPTR_    - - - - - - - - - - - - - - - L G L L L Q S S K F K E M M E M T A V T D C P P T - - - - - - - S S S D L E L T P C S F P
pt009075_POPTR_    T T L T Q P R P A T N P S S A L G L L L Q S S K F K E M M E M T A V A D C P P T - - - - - - - P P S G L D P T P C S F L
pt029433_POPTR_    - - - - - - - - G G S A S S A L G L L L Q S S K F K E I L E R T S A A D C P L T P L P P L T P P E S D R D P P R R S F P
 
AT1G16060.2     E D I Q T Y F G C Q N S G K L T A E E D D V I F G D L D S F L T P D F Y S E L N D C - - - - - - - - - - - - - -
pt005285_POPTR_    E D V Q T Y F E C Q Y S S S Y G D Q G D D M I F G D Y N S F M P P M F H S D F - - - - - - - - - - - - - - - - -
pt009075_POPTR_    E D V Q T Y F D C L D S S N Y G D Q G D D M I F G D L N S F V P P M F Q C D F E T - - - - - - - - - - - - - - -
pt029433_POPTR_    D D I Q T V F D C Q D S S S Y T D D D D I N I F G E L N P F A S P I F H Y E L D G Q E M V F G P N K S N I L T T
 
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