fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G16060.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb005915 not found in 398aa AT1G16060.1 1st_not 0.464530892 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G16060.2     ----------------------------------------------MFFFLVLLTMLTGI
Sb005915_Sorbi1 MAKPRKNSAAANNNNSSSNGAGDLTPRAKPKRTRKSVPRESPTQRSSVYRGVTRHRWTGR
                                                               .:  *     ** 

AT1G16060.2     MA--------------DSSRAVYLGAYDEEDAAARAYDLAALKYWGRDTILNFPLCNYEE
Sb005915_Sorbi1 FEAHLWDKNSWNESQNKKGKQVYLGAYDDEEAAARAYDLAALKYWGPDTILNFPASAYEG
                :               ...: *******:*:*************** ******* . ** 

AT1G16060.2     DIKEMESQSKEEYIGSLRRKSSGFSRGVSKYRGVAKHHHNGRWEARIGRVFGNKYLYLGT
Sb005915_Sorbi1 EMKGMEGQSREEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGT
                ::* **.**:*************************:************************

AT1G16060.2     YATQEEAAIAYDIAAIEYRGLNAVTNFDISRYLK--------------------------
Sb005915_Sorbi1 YATQEEAAMAYDMAAIEYRGLNAVTNFDLSRYIKWLRPGAGGMAAAAAAAQNPHPMLGGL
                ********:***:***************:***:*                          

AT1G16060.2     -----LPVPEN----------------------PIDTANNLLESP-HSDLSPFIKPNHES
Sb005915_Sorbi1 AQQLLLPPPADTTTTDGAGAAAFQHDHHGAEAFPLPPRTSLGHTPTTSALSLLLQSPKFK
                     ** * :                      *: . ..* .:*  * ** :::. : .

AT1G16060.2     DLSQSQSSSEDNDDRKTKLLKSSPLVAEEVIGPSTPPEIAPPRRS---------------
Sb005915_Sorbi1 EMIQRTESGTTTTTTTTSSLSSSP--------PPTPSP-SPPRRSPAPTQPPVQAAARDA
                :: *  .*.  .   .*. *.***        *.**.  :*****               

AT1G16060.2     ------FPEDIQTYFGCQNSGKLTAEEDDVIFGDLDSFLTPDFYSELNDC
Sb005915_Sorbi1 SPHQRGFPEDVQTFFGCEDTAGIDVEA--LFFGDLAAYATPAFHFEMDL-
                      ****:**:***:::. : .*   ::**** :: ** *: *::
BoxShade v3.31 C (beta, 970507) Output
AT1G16060.2     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M F F F L V L L T M L T G I
Sb005915_Sorbi1    M A K P R K N S A A A N N N N S S S N G A G D L T P R A K P K R T R K S V P R E S P T Q R S S V Y R G V T R H R W T G R
 
AT1G16060.2     M A - - - - - - - - - - - - - - D S S R A V Y L G A Y D E E D A A A R A Y D L A A L K Y W G R D T I L N F P L C N Y E E
Sb005915_Sorbi1    F E A H L W D K N S W N E S Q N K K G K Q V Y L G A Y D D E E A A A R A Y D L A A L K Y W G P D T I L N F P A S A Y E G
 
AT1G16060.2     D I K E M E S Q S K E E Y I G S L R R K S S G F S R G V S K Y R G V A K H H H N G R W E A R I G R V F G N K Y L Y L G T
Sb005915_Sorbi1    E M K G M E G Q S R E E Y I G S L R R K S S G F S R G V S K Y R G V A R H H H N G R W E A R I G R V F G N K Y L Y L G T
 
AT1G16060.2     Y A T Q E E A A I A Y D I A A I E Y R G L N A V T N F D I S R Y L K - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb005915_Sorbi1    Y A T Q E E A A M A Y D M A A I E Y R G L N A V T N F D L S R Y I K W L R P G A G G M A A A A A A A Q N P H P M L G G L
 
AT1G16060.2     - - - - - L P V P E N - - - - - - - - - - - - - - - - - - - - - - P I D T A N N L L E S P - H S D L S P F I K P N H E S
Sb005915_Sorbi1    A Q Q L L L P P P A D T T T T D G A G A A A F Q H D H H G A E A F P L P P R T S L G H T P T T S A L S L L L Q S P K F K
 
AT1G16060.2     D L S Q S Q S S S E D N D D R K T K L L K S S P L V A E E V I G P S T P P E I A P P R R S - - - - - - - - - - - - - - -
Sb005915_Sorbi1    E M I Q R T E S G T T T T T T T T S S L S S S P - - - - - - - - P P T P S P - S P P R R S P A P T Q P P V Q A A A R D A
 
AT1G16060.2     - - - - - - F P E D I Q T Y F G C Q N S G K L T A E E D D V I F G D L D S F L T P D F Y S E L N D C
Sb005915_Sorbi1    S P H Q R G F P E D V Q T F F G C E D T A G I D V E A - - L F F G D L A A Y A T P A F H F E M D L -
 
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