fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G16060.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb015884 not found in 440aa AT1G16060.1 not_not 0.402745995 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G16060.2     MFFFLVLLTM----------------LTGI--------------------------MADS
Sb015884_Sorbi1 ---------MARPRKNAGTDEDNPNAATGVSVTGKPPKLKRVRRKGEPRESSTPSQRSSA
                         *                 **:                           :.:

AT1G16060.2     SRAVY---------------------------LGAYDEEDAAARAYDLAALKYWGRDTIL
Sb015884_Sorbi1 YRGVTRHRWTGRFEAHLWDKDARNGSRNKKGKQGAYDDEEAAARAHDLAALKYWGPATVL
                 *.*                             ****:*:*****:*********  *:*

AT1G16060.2     NFPLCNYEEDIKEMESQSKEEYIGSLRRKSSGFSRGVSKYRGVAKHHHNGRWEARIGRVF
Sb015884_Sorbi1 NFPLCGYDEELREMEAQPREEYIGSLRRRSSGFSRGVSKYRGVARHHHNGRWEARIGRVL
                *****.*:*:::***:*.:*********:***************:**************:

AT1G16060.2     GNKYLYLGTYATQEEAAIAYDIAAIEYRGLNAVTNFDISRYL------------------
Sb015884_Sorbi1 GNKYLYLGTFATQEEAAVAYDIAAIEHRGLNAVTNFDISHYVNHWHRHCHGPSDDSLGVV
                *********:*******:********:************:*:                  

AT1G16060.2     -------KLP--VPENPIDTANNLLESP---------------HSDLSPF----------
Sb015884_Sorbi1 VDDVAAFQLPDDLPECPA-AAIGVEETTGGDAEFHNGEEGYLQHHTSGPFGAQQQLPDET
                       :**  :** *  :* .: *:.               *   .**          

AT1G16060.2     -------IKPN----------------------------HESDLSQSQSSSEDNDDRKTK
Sb015884_Sorbi1 GALAAHQMAPNSSALDMVLQSPKFKELMEQVSAAAAAVASESSIGGSMSSSSPSPSLSS-
                       : **                             **.:. * ***. . . .: 

AT1G16060.2     LLKSSPL-----VAEEVIGPSTP----------PEI---APPRR-SFPEDIQTYFGCQNS
Sb015884_Sorbi1 -FSPSPLQLPSPSSLSSFSPSSPLQQPSPPLQQPEFVEGAPAARCSFPDDVQTFFDFENE
                 :..***      : . :.**:*          **:   **. * ***:*:**:*. :*.

AT1G16060.2     GKLT---AEEDDVIFGDLDSFLTPDFYSELNDC
Sb015884_Sorbi1 SDMSFMYAEVDTFLFGDLGAYAAPIFHFDLDV-
                ..::   ** * .:****.:: :* *: :*:
BoxShade v3.31 C (beta, 970507) Output
AT1G16060.2     M F F F L V L L T M - - - - - - - - - - - - - - - - L T G I - - - - - - - - - - - - - - - - - - - - - - - - - - M A D S
Sb015884_Sorbi1    - - - - - - - - - M A R P R K N A G T D E D N P N A A T G V S V T G K P P K L K R V R R K G E P R E S S T P S Q R S S A
 
AT1G16060.2     S R A V Y - - - - - - - - - - - - - - - - - - - - - - - - - - - L G A Y D E E D A A A R A Y D L A A L K Y W G R D T I L
Sb015884_Sorbi1    Y R G V T R H R W T G R F E A H L W D K D A R N G S R N K K G K Q G A Y D D E E A A A R A H D L A A L K Y W G P A T V L
 
AT1G16060.2     N F P L C N Y E E D I K E M E S Q S K E E Y I G S L R R K S S G F S R G V S K Y R G V A K H H H N G R W E A R I G R V F
Sb015884_Sorbi1    N F P L C G Y D E E L R E M E A Q P R E E Y I G S L R R R S S G F S R G V S K Y R G V A R H H H N G R W E A R I G R V L
 
AT1G16060.2     G N K Y L Y L G T Y A T Q E E A A I A Y D I A A I E Y R G L N A V T N F D I S R Y L - - - - - - - - - - - - - - - - - -
Sb015884_Sorbi1    G N K Y L Y L G T F A T Q E E A A V A Y D I A A I E H R G L N A V T N F D I S H Y V N H W H R H C H G P S D D S L G V V
 
AT1G16060.2     - - - - - - - K L P - - V P E N P I D T A N N L L E S P - - - - - - - - - - - - - - - H S D L S P F - - - - - - - - - -
Sb015884_Sorbi1    V D D V A A F Q L P D D L P E C P A - A A I G V E E T T G G D A E F H N G E E G Y L Q H H T S G P F G A Q Q Q L P D E T
 
AT1G16060.2     - - - - - - - I K P N - - - - - - - - - - - - - - - - - - - - - - - - - - - - H E S D L S Q S Q S S S E D N D D R K T K
Sb015884_Sorbi1    G A L A A H Q M A P N S S A L D M V L Q S P K F K E L M E Q V S A A A A A V A S E S S I G G S M S S S S P S P S L S S -
 
AT1G16060.2     L L K S S P L - - - - - V A E E V I G P S T P - - - - - - - - - - P E I - - - A P P R R - S F P E D I Q T Y F G C Q N S
Sb015884_Sorbi1    - F S P S P L Q L P S P S S L S S F S P S S P L Q Q P S P P L Q Q P E F V E G A P A A R C S F P D D V Q T F F D F E N E
 
AT1G16060.2     G K L T - - - A E E D D V I F G D L D S F L T P D F Y S E L N D C
Sb015884_Sorbi1    S D M S F M Y A E V D T F L F G D L G A Y A A P I F H F D L D V -
 
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