fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G16060.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm017156 not found in 287aa AT1G16060.1 not_not 0.535469107 III
Gm046315 not found in 350aa AT1G16060.1 not_not 0.441647597 III
Gm016010 not found in 224aa AT1G79700.2 not_not 0.409610983 III
Gm009840 not found in 214aa AT1G79700.2 not_not 0.405034324 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G16060.2     MFFFLVLLTMLTGIMADSSR----------------------------------------
gm016010_Glyma0 ------------------------------------------------------------
gm009840_Glyma0 ------------------------------------------------------------
gm046315_Glyma1 --------------MAKKSQLRTQKNNVTTNDDNNLNVTNTVTTKVKRTRRSVPRDSPPQ
gm017156_Glyma0 --------------MAKKSQ-------------KSLNSTG------KRTRKSVPRDSPPQ
                                                                            

AT1G16060.2     --AVY-------------------------------LGAYDEEDAAARAYDLAALKYWGR
gm016010_Glyma0 ------------------------------------------------------------
gm009840_Glyma0 ------------------------------------------------------------
gm046315_Glyma1 RSSIYRGVTRHRWTGRYEAHLWDKHCWNESQNKKGRQGAYDNEEAAAHAYDLAALKYWGQ
gm017156_Glyma0 RSSIYRGVTRHRWTGRYEAHLWDKNCWNESQSKKGRQGAYDDEEAAARAYDLAALKYWGQ
                                                                            

AT1G16060.2     DTILNFPLCNYEEDIKEMESQSKEEYIGSLRRKSSGFSRGVSKYRGVAKHHHNGRWEARI
gm016010_Glyma0 -----------------MEGQSREEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARI
gm009840_Glyma0 -----------------MEGQSREEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARI
gm046315_Glyma1 DTILNFPLSNYLNELKEMEGQSREEYIGSLRRKSSGFSRGISKYRGVARHHHNGRWEARI
gm017156_Glyma0 DTILNFPLSNYEEKLKEMEGQSKEEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARI
                                 **.**:*****************:*******:***********

AT1G16060.2     GRVFGNKYLYLGTYATQEEAAIAYDIAAIEYRGLNAVTNFDISRYLKLPVPENPIDTAN-
gm016010_Glyma0 GRVFGNKYLYLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWLKPNNNNNKVNS
gm009840_Glyma0 GRVFGNKYLYLGTYATQEEAATAYDMAAIEYRGVNAVTNFDLSRYIKWLKPNNNNTTVNS
gm046315_Glyma1 GKVFGNKYLYLGTYATQEEAATAYDLAAIEYRGLNAVTNFDLSRYI-----NINLTNINN
gm017156_Glyma0 GRVFGNKYLYLGTYATQEEAAAAYDMAAIEYRGLNAVTNFDLSRYI-----N--------
                *:******************* ***:*******:*******:***:     :        

AT1G16060.2     -NLLES-PHSDLSPFIKPNHESDLS--QSQSSSEDNDD-RKTKLLKSSPLVA--------
gm016010_Glyma0 NNLIVSIPNCATNFTPNSNQQQGFNFFNSQESFNNN---EEAAM--TQPRPA--AATSAL
gm009840_Glyma0 -NLIDSNPNCETNFTSNSNQQQGFNFFNRQESF-NN---EEAAM--TQPRPA--VATSAL
gm046315_Glyma1 NN------NCTNSFTPSPDQEQEASFFHNKDSL-NNTIVEEVTLVPHQPRPA--SATSAL
gm017156_Glyma0 --------------WPRPKTEEN-----------------------HQTIPSNENVNSNA
                                 .. :.                         ..  :        

AT1G16060.2     ---------------EEVIGPSTPP-EIAPPRRSFPEDIQTYFGCQNSGKLTAEEDDVIF
gm016010_Glyma0 GLLLQSSKFKEMMEMTSAIDLSTPPSESELPPCTFPDDIQTYFECEDSHRYG-EGDDIMF
gm009840_Glyma0 GLLLQSSKFKEMMEMTSATDLSTPPSESELPSCTFPDDIQTYFECEDSHRYG-EGDDIMF
gm046315_Glyma1 ELLLQSSKFKEMMEMTSVANLSSTQMESELPQCTFPDHIQTYFEYEDSNRYE-EGDDLMF
gm017156_Glyma0 ELELGSAS-DEITE-EGVAPSS----ESNPSRRTFPEDIQTIFENQDSGIYT-ENDDIIF
                                 .   *    *   .  :**:.*** *  ::*     * **::*

AT1G16060.2     GDLDSFLTPDFYSELNDC--
gm016010_Glyma0 SELNGFVPP-----------
gm009840_Glyma0 S-------------------
gm046315_Glyma1 -KFNEFSSIVPFYQCDEFES
gm017156_Glyma0 GDLGSFGAPIFHYELDV---
BoxShade v3.31 C (beta, 970507) Output
AT1G16060.2     M F F F L V L L T M L T G I M A D S S R - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm016010_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm009840_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm046315_Glyma1    - - - - - - - - - - - - - - M A K K S Q L R T Q K N N V T T N D D N N L N V T N T V T T K V K R T R R S V P R D S P P Q
gm017156_Glyma0    - - - - - - - - - - - - - - M A K K S Q - - - - - - - - - - - - - K S L N S T G - - - - - - K R T R K S V P R D S P P Q
 
AT1G16060.2     - - A V Y - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - L G A Y D E E D A A A R A Y D L A A L K Y W G R
gm016010_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm009840_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm046315_Glyma1    R S S I Y R G V T R H R W T G R Y E A H L W D K H C W N E S Q N K K G R Q G A Y D N E E A A A H A Y D L A A L K Y W G Q
gm017156_Glyma0    R S S I Y R G V T R H R W T G R Y E A H L W D K N C W N E S Q S K K G R Q G A Y D D E E A A A R A Y D L A A L K Y W G Q
 
AT1G16060.2     D T I L N F P L C N Y E E D I K E M E S Q S K E E Y I G S L R R K S S G F S R G V S K Y R G V A K H H H N G R W E A R I
gm016010_Glyma0    - - - - - - - - - - - - - - - - - M E G Q S R E E Y I G S L R R K S S G F S R G V S K Y R G V A R H H H N G R W E A R I
gm009840_Glyma0    - - - - - - - - - - - - - - - - - M E G Q S R E E Y I G S L R R K S S G F S R G V S K Y R G V A R H H H N G R W E A R I
gm046315_Glyma1    D T I L N F P L S N Y L N E L K E M E G Q S R E E Y I G S L R R K S S G F S R G I S K Y R G V A R H H H N G R W E A R I
gm017156_Glyma0    D T I L N F P L S N Y E E K L K E M E G Q S K E E Y I G S L R R K S S G F S R G V S K Y R G V A R H H H N G R W E A R I
 
AT1G16060.2     G R V F G N K Y L Y L G T Y A T Q E E A A I A Y D I A A I E Y R G L N A V T N F D I S R Y L K L P V P E N P I D T A N -
gm016010_Glyma0    G R V F G N K Y L Y L G T Y A T Q E E A A T A Y D M A A I E Y R G L N A V T N F D L S R Y I K W L K P N N N N N K V N S
gm009840_Glyma0    G R V F G N K Y L Y L G T Y A T Q E E A A T A Y D M A A I E Y R G V N A V T N F D L S R Y I K W L K P N N N N T T V N S
gm046315_Glyma1    G K V F G N K Y L Y L G T Y A T Q E E A A T A Y D L A A I E Y R G L N A V T N F D L S R Y I - - - - - N I N L T N I N N
gm017156_Glyma0    G R V F G N K Y L Y L G T Y A T Q E E A A A A Y D M A A I E Y R G L N A V T N F D L S R Y I - - - - - N - - - - - - - -
 
AT1G16060.2     - N L L E S - P H S D L S P F I K P N H E S D L S - - Q S Q S S S E D N D D - R K T K L L K S S P L V A - - - - - - - -
gm016010_Glyma0    N N L I V S I P N C A T N F T P N S N Q Q Q G F N F F N S Q E S F N N N - - - E E A A M - - T Q P R P A - - A A T S A L
gm009840_Glyma0    - N L I D S N P N C E T N F T S N S N Q Q Q G F N F F N R Q E S F - N N - - - E E A A M - - T Q P R P A - - V A T S A L
gm046315_Glyma1    N N - - - - - - N C T N S F T P S P D Q E Q E A S F F H N K D S L - N N T I V E E V T L V P H Q P R P A - - S A T S A L
gm017156_Glyma0    - - - - - - - - - - - - - - W P R P K T E E N - - - - - - - - - - - - - - - - - - - - - - - H Q T I P S N E N V N S N A
 
AT1G16060.2     - - - - - - - - - - - - - - - E E V I G P S T P P - E I A P P R R S F P E D I Q T Y F G C Q N S G K L T A E E D D V I F
gm016010_Glyma0    G L L L Q S S K F K E M M E M T S A I D L S T P P S E S E L P P C T F P D D I Q T Y F E C E D S H R Y G - E G D D I M F
gm009840_Glyma0    G L L L Q S S K F K E M M E M T S A T D L S T P P S E S E L P S C T F P D D I Q T Y F E C E D S H R Y G - E G D D I M F
gm046315_Glyma1    E L L L Q S S K F K E M M E M T S V A N L S S T Q M E S E L P Q C T F P D H I Q T Y F E Y E D S N R Y E - E G D D L M F
gm017156_Glyma0    E L E L G S A S - D E I T E - E G V A P S S - - - - E S N P S R R T F P E D I Q T I F E N Q D S G I Y T - E N D D I I F
 
AT1G16060.2     G D L D S F L T P D F Y S E L N D C - -
gm016010_Glyma0    S E L N G F V P P - - - - - - - - - - -
gm009840_Glyma0    S - - - - - - - - - - - - - - - - - - -
gm046315_Glyma1    - K F N E F S S I V P F Y Q C D E F E S
gm017156_Glyma0    G D L G S F G A P I F H Y E L D V - - -
 
0