fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G16070.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sm019540 not found in 271aa AT1G16070.1 1st_1st 0.329829172 Ib
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G16070.1     MAGSRKVNDLLEENKGNVDTITGSLSTQKGEDKENVSPEKVSTSVETRKLDRALKSQSMK
Sm019540_Selmo1 ------------------------------------------------------------
                                                                            

AT1G16070.1     GNSGFPTEVTNFKSFSTGGRTALKQSSLQACMQKNSEVDKSSFGMKTWTSVDSEHSSSLK
Sm019540_Selmo1 ------------------------------------------------------------
                                                                            

AT1G16070.1     VWEFSDSEAAPASSWSTLPNRALLCKTLPLDVGRCTCLIVKEQ--SPEGLSHGSVYSLYT
Sm019540_Selmo1 -----DEEAAPASAWSTLGNRVLLLKPLPVDVGKCRCYIVREHRDGP------SVYSLYT
                     *.******:**** **.** *.**:***:* * **:*:  .*      *******

AT1G16070.1     HEGRGRKDRKLAVAYHSRRNGKSIFRVAQNVKG-LLCSSDESYVGSMTANLLGSKYYIWD
Sm019540_Selmo1 DEGQGRQDRLLAVARHRRRVGRSEFLIAQSTIGTVLQSQDEGYLGNLGANLVGSRYQLWE
                .**:**:** **** * ** *:* * :**.. * :* *.**.*:*.: ***:**:* :*:

AT1G16070.1     KGVRVGSVGKMVKPLLSVVIFTPTITTWTGSYRRMRTLLPKQQPMQKNNNK-QVQQASK-
Sm019540_Selmo1 QGDFLSARQKVLQ---GVVTFEPTVTTLTGDSRKLKAFIPKYQSIQTNGSSIQVKRSLSF
                :*  :.:  *:::   .** * **:** **. *::::::** *.:*.*... **::: . 

AT1G16070.1     ---LPLDWLENKEKIQKLCSRIPHYNKISKQHELDFRDRGRTGLRIQSSVKNFQLTLTET
Sm019540_Selmo1 NFGLGKDWEENMSNVKELVSKTPCYNNILKRYELDFRESSKMGAKIKTSVKNFQLTVEDQ
                   *  ** ** .::::* *: * **:* *::*****: .: * :*::********: : 

AT1G16070.1     PRQTILQMGRVDKARYVIDFRYPFSGYQAFCICLASIDSKLCCTV
Sm019540_Selmo1 GKQAVLLLGKLSKSTYVMEYRFPLTGFQAFGICLASIDSKLCCTV
                 :*::* :*::.*: **:::*:*::*:*** **************
BoxShade v3.31 C (beta, 970507) Output
AT1G16070.1     M A G S R K V N D L L E E N K G N V D T I T G S L S T Q K G E D K E N V S P E K V S T S V E T R K L D R A L K S Q S M K
Sm019540_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT1G16070.1     G N S G F P T E V T N F K S F S T G G R T A L K Q S S L Q A C M Q K N S E V D K S S F G M K T W T S V D S E H S S S L K
Sm019540_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT1G16070.1     V W E F S D S E A A P A S S W S T L P N R A L L C K T L P L D V G R C T C L I V K E Q - - S P E G L S H G S V Y S L Y T
Sm019540_Selmo1    - - - - - D E E A A P A S A W S T L G N R V L L L K P L P V D V G K C R C Y I V R E H R D G P - - - - - - S V Y S L Y T
 
AT1G16070.1     H E G R G R K D R K L A V A Y H S R R N G K S I F R V A Q N V K G - L L C S S D E S Y V G S M T A N L L G S K Y Y I W D
Sm019540_Selmo1    D E G Q G R Q D R L L A V A R H R R R V G R S E F L I A Q S T I G T V L Q S Q D E G Y L G N L G A N L V G S R Y Q L W E
 
AT1G16070.1     K G V R V G S V G K M V K P L L S V V I F T P T I T T W T G S Y R R M R T L L P K Q Q P M Q K N N N K - Q V Q Q A S K -
Sm019540_Selmo1    Q G D F L S A R Q K V L Q - - - G V V T F E P T V T T L T G D S R K L K A F I P K Y Q S I Q T N G S S I Q V K R S L S F
 
AT1G16070.1     - - - L P L D W L E N K E K I Q K L C S R I P H Y N K I S K Q H E L D F R D R G R T G L R I Q S S V K N F Q L T L T E T
Sm019540_Selmo1    N F G L G K D W E E N M S N V K E L V S K T P C Y N N I L K R Y E L D F R E S S K M G A K I K T S V K N F Q L T V E D Q
 
AT1G16070.1     P R Q T I L Q M G R V D K A R Y V I D F R Y P F S G Y Q A F C I C L A S I D S K L C C T V
Sm019540_Selmo1    G K Q A V L L L G K L S K S T Y V M E Y R F P L T G F Q A F G I C L A S I D S K L C C T V
 
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