fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G16070.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt030411 not found in 407aa AT1G16070.1 1st_1st 0.538764783 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G16070.1     MAGSRK-------------VN--------------DLL----EENKGNVDTITGSLSTQK
pt030411_POPTR_ MAGFRKPTLPNQSSYNSVYVNPLTDSKHHHTCSEGDLLTKSFTDNKENID------NTAK
                *** **             **              ***     :** *:*      .* *

AT1G16070.1     --GEDKENVSPEKVSTSVETRKLDRALKSQSMKGN-SGFPT-EVTNFKSFSTGGRTALKQ
pt030411_POPTR_ FGGVDKENAVPNNS-------------KPLSTNGSLSVLPKPQLSNMKSLSTG--RVLKP
                  * ****. *::              *. * :*. * :*. :::*:**:***   .** 

AT1G16070.1     SSLQACMQKNSEVDKSSFGMKTWTSVDSEHSSSLKVWEFSDSEAAPASSWSTLPNRALLC
pt030411_POPTR_ SSLQLCMQMNEP--EKVFKSKIWDSAESEKSNSVNIWDYSDSEAAPASSWSALPNRALLC
                **** *** *.   :. *  * * *.:**:*.*:::*::************:********

AT1G16070.1     KTLPLDVGRCTCLIVKEQSPEGLSHGSVYSLYTHEGRGRKDRKLAVAYHSRRNGKSIFRV
pt030411_POPTR_ RPLPLDIGRCTCVIMKEALPEGLDGGTLYSLYTNEGHGRQDRKLAIAHHKRRNGKSEFTI
                :.****:*****:*:**  ****. *::*****:**:**:*****:*:*.****** * :

AT1G16070.1     AQNVKGLLCSSDESYVGSMTANLLGSKYYIWDKGVRVGSVGKMVKPLLSVVIFTPTITTW
pt030411_POPTR_ AQNLKGVLSSSDDSFVGNVTANLMGSKYHIWDQGGAVNS--KRGNLLLAVVTFKPTIATW
                ***:**:*.***:*:**.:****:****:***:*  *.*  *  : **:** *.***:**

AT1G16070.1     TGSYRRMRTLLPKQQPMQKNNNKQVQQASKLPLDWLENKEKIQKLCSRIPHYNKISKQHE
pt030411_POPTR_ TGSYRIMRAYVPKHQSMQLKNTTLMQHINGLARDWEGKMDKVHKLCSRTPRYNNMSKQYE
                ***** **: :**:*.** :*.. :*: . *. **  : :*::***** *:**::***:*

AT1G16070.1     LDFRDRGRTGLRIQSSVKNFQLTLTETPRQTILQMGRVDKARYVIDFRYPFSGYQAFCIC
pt030411_POPTR_ LDFRDRGRAGLGIQSSVKNFQLTLEENGKQTILQLGRVGKSKFVMDFRYPLTGYQAFCIC
                ********:** ************ *. :*****:***.*:::*:*****::********

AT1G16070.1     LASIDSKLCCTV
pt030411_POPTR_ LASIDSKLCCSM
                **********::
BoxShade v3.31 C (beta, 970507) Output
AT1G16070.1     M A G S R K - - - - - - - - - - - - - V N - - - - - - - - - - - - - - D L L - - - - E E N K G N V D T I T G S L S T Q K
pt030411_POPTR_    M A G F R K P T L P N Q S S Y N S V Y V N P L T D S K H H H T C S E G D L L T K S F T D N K E N I D - - - - - - N T A K
 
AT1G16070.1     - - G E D K E N V S P E K V S T S V E T R K L D R A L K S Q S M K G N - S G F P T - E V T N F K S F S T G G R T A L K Q
pt030411_POPTR_    F G G V D K E N A V P N N S - - - - - - - - - - - - - K P L S T N G S L S V L P K P Q L S N M K S L S T G - - R V L K P
 
AT1G16070.1     S S L Q A C M Q K N S E V D K S S F G M K T W T S V D S E H S S S L K V W E F S D S E A A P A S S W S T L P N R A L L C
pt030411_POPTR_    S S L Q L C M Q M N E P - - E K V F K S K I W D S A E S E K S N S V N I W D Y S D S E A A P A S S W S A L P N R A L L C
 
AT1G16070.1     K T L P L D V G R C T C L I V K E Q S P E G L S H G S V Y S L Y T H E G R G R K D R K L A V A Y H S R R N G K S I F R V
pt030411_POPTR_    R P L P L D I G R C T C V I M K E A L P E G L D G G T L Y S L Y T N E G H G R Q D R K L A I A H H K R R N G K S E F T I
 
AT1G16070.1     A Q N V K G L L C S S D E S Y V G S M T A N L L G S K Y Y I W D K G V R V G S V G K M V K P L L S V V I F T P T I T T W
pt030411_POPTR_    A Q N L K G V L S S S D D S F V G N V T A N L M G S K Y H I W D Q G G A V N S - - K R G N L L L A V V T F K P T I A T W
 
AT1G16070.1     T G S Y R R M R T L L P K Q Q P M Q K N N N K Q V Q Q A S K L P L D W L E N K E K I Q K L C S R I P H Y N K I S K Q H E
pt030411_POPTR_    T G S Y R I M R A Y V P K H Q S M Q L K N T T L M Q H I N G L A R D W E G K M D K V H K L C S R T P R Y N N M S K Q Y E
 
AT1G16070.1     L D F R D R G R T G L R I Q S S V K N F Q L T L T E T P R Q T I L Q M G R V D K A R Y V I D F R Y P F S G Y Q A F C I C
pt030411_POPTR_    L D F R D R G R A G L G I Q S S V K N F Q L T L E E N G K Q T I L Q L G R V G K S K F V M D F R Y P L T G Y Q A F C I C
 
AT1G16070.1     L A S I D S K L C C T V
pt030411_POPTR_    L A S I D S K L C C S M
 
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