fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G16490.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb010993 not found in 388aa AT1G79180.1 1st_not 0.436475409 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G16490.1     MGKGRAPCCDKTKVKRGPWSHDEDLKLISFIHKNGHENWRSLPKQAGLLRCGKSCRLRWI
Sb010993_Sorbi1 MGRGRAPCCAKVGLNRGSWTPQEDMRLIAYIQKHGHANWRALPKQAGLLRCGKSCRLRWI
                **:****** *. ::**.*: :**::**::*:*:** ***:*******************

AT1G16490.1     NYLRPDVKRGNFSAEEEDTIIKLHQSFGNKWSKIASKLPGRTDNEIKNVWHTHLKK----
Sb010993_Sorbi1 NYLRPDLKRGNFTADEEETIIRLHGLLGNKWSKIAACLPGRTDNEIKNVWNTHLKKKKQV
                ******:*****:*:**:***:**  :********: *************:*****    

AT1G16490.1     ------RLSSETNLNADEAGSKGSLNEEENSQESSPNASMSFAGSNISSKDD--------
Sb010993_Sorbi1 APREEQKAGAAADKNDDDGAASGEAGTPATAASSSASSSTTTTTTNNSSAGSDNSGDQCG
                      : .: :: * *:..:.*. .   .: .**..:* : : :* ** ..        

AT1G16490.1     --------DAQISQMFEHILTYSEFTGMLQEVDKP-------------------------
Sb010993_Sorbi1 TSREPDVIDASLLQL-EDI----DVSDML--VDAPPAAAQPCQAPMLSSPCSSSSLTTTC
                        **.: *: *.*    :.:.**  ** *                         

AT1G16490.1     ------ELLEMP-FDLDPDIWSFIDGSDSFQQPENRA------------LQESEEDEV--
Sb010993_Sorbi1 VGGGVEELIELPVIEIEPEIWSIIDGESATDAPDASGGGTAPCTGTAAVVSTSEAEEAAA
                      **:*:* ::::*:***:***..: : *:  .            :. ** :*.  

AT1G16490.1     --DKWFKHLESELGL--EENDNQQQQ----------------------------------
Sb010993_Sorbi1 ANDWWLENLEKELGLWGPAEDTQAAHPDLLDHIAAGFSPLGALELERDPVSTYFQTAPAV
                  * *:::**.****    :*.*  :                                  

AT1G16490.1     ------------------QQHKQGTEDEHSSSLLESYELLIH
Sb010993_Sorbi1 GEPELMVAEPSAVLLRVINEQQEGT-DPFRPVEIEG------
                                  :::::** * . .  :*.
BoxShade v3.31 C (beta, 970507) Output
AT1G16490.1     M G K G R A P C C D K T K V K R G P W S H D E D L K L I S F I H K N G H E N W R S L P K Q A G L L R C G K S C R L R W I
Sb010993_Sorbi1    M G R G R A P C C A K V G L N R G S W T P Q E D M R L I A Y I Q K H G H A N W R A L P K Q A G L L R C G K S C R L R W I
 
AT1G16490.1     N Y L R P D V K R G N F S A E E E D T I I K L H Q S F G N K W S K I A S K L P G R T D N E I K N V W H T H L K K - - - -
Sb010993_Sorbi1    N Y L R P D L K R G N F T A D E E E T I I R L H G L L G N K W S K I A A C L P G R T D N E I K N V W N T H L K K K K Q V
 
AT1G16490.1     - - - - - - R L S S E T N L N A D E A G S K G S L N E E E N S Q E S S P N A S M S F A G S N I S S K D D - - - - - - - -
Sb010993_Sorbi1    A P R E E Q K A G A A A D K N D D D G A A S G E A G T P A T A A S S S A S S S T T T T T T N N S S A G S D N S G D Q C G
 
AT1G16490.1     - - - - - - - - D A Q I S Q M F E H I L T Y S E F T G M L Q E V D K P - - - - - - - - - - - - - - - - - - - - - - - - -
Sb010993_Sorbi1    T S R E P D V I D A S L L Q L - E D I - - - - D V S D M L - - V D A P P A A A Q P C Q A P M L S S P C S S S S L T T T C
 
AT1G16490.1     - - - - - - E L L E M P - F D L D P D I W S F I D G S D S F Q Q P E N R A - - - - - - - - - - - - L Q E S E E D E V - -
Sb010993_Sorbi1    V G G G V E E L I E L P V I E I E P E I W S I I D G E S A T D A P D A S G G G T A P C T G T A A V V S T S E A E E A A A
 
AT1G16490.1     - - D K W F K H L E S E L G L - - E E N D N Q Q Q Q - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb010993_Sorbi1    A N D W W L E N L E K E L G L W G P A E D T Q A A H P D L L D H I A A G F S P L G A L E L E R D P V S T Y F Q T A P A V
 
AT1G16490.1     - - - - - - - - - - - - - - - - - - Q Q H K Q G T E D E H S S S L L E S Y E L L I H
Sb010993_Sorbi1    G E P E L M V A E P S A V L L R V I N E Q Q E G T - D P F R P V E I E G - - - - - -
 
0