fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G16490.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm021564 not found in 282aa AT1G79180.1 1st_not 0.510245901 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G16490.1     MGKGRAPCCDKTKVKRGPWSHDEDLKLISFIHKNGHENWRSLPKQAGLLRCGKSCRLRWI
gm021564_Glyma0 MGKGRAPCCDKTQVKRGPWSPAEDLKLIAFIQKYGHENWRALPKQAGLLRCGKSCRLRWI
                ************:*******  ******:**:* ******:*******************

AT1G16490.1     NYLRPDVKRGNFSAEEEDTIIKLHQSFGNKWSKIASKLPGRTDNEIKNVWHTHLKKRLSS
gm021564_Glyma0 NYLRPDVKRGNFTLEEEENIIRLHKALGNKWSKIASRLPGRTDNEIKNVWNTHLKKRL--
                ************: ***:.**:**:::*********:*************:*******  

AT1G16490.1     ETNLNADEAGSKGSLNEEENSQESSPNASMSFAGSNISSKDDDAQI--------------
gm021564_Glyma0 --------APKKGS---ESSADESKPESSITSASS--SSSESNYQLKIKWSRIQKNKCPM
                        * .***   *..::**.*::*:: *.*  **.:.: *:              

AT1G16490.1     -------------SQMFEH------------ILTYSEFTGMLQEVDKP-ELLEMPFDLDP
gm021564_Glyma0 NLLTSLRIQKVNTSQIVEHKPEEEQLASPLPYLGHYDVGSMLEEVDKPNQLIEIPWEPDY
                             **:.**             * : :. .**:***** :*:*:*:: * 

AT1G16490.1     DIWSFIDGSDSFQQPENRALQ--------------ESEED-EVDKWFKHLESELGLEEND
gm021564_Glyma0 DFWKLLDDDNSLESFQSNEVQLGEFPAIQNIILGEESVHDAEAKKWSQDFENEFGVV---
                *:*.::*..:*::. :.. :*              ** .* *..** :.:*.*:*:    

AT1G16490.1     NQQQQQQHKQGTEDEHSSSLLESYELLIH
gm021564_Glyma0 -----------------------------
BoxShade v3.31 C (beta, 970507) Output
AT1G16490.1     M G K G R A P C C D K T K V K R G P W S H D E D L K L I S F I H K N G H E N W R S L P K Q A G L L R C G K S C R L R W I
gm021564_Glyma0    M G K G R A P C C D K T Q V K R G P W S P A E D L K L I A F I Q K Y G H E N W R A L P K Q A G L L R C G K S C R L R W I
 
AT1G16490.1     N Y L R P D V K R G N F S A E E E D T I I K L H Q S F G N K W S K I A S K L P G R T D N E I K N V W H T H L K K R L S S
gm021564_Glyma0    N Y L R P D V K R G N F T L E E E E N I I R L H K A L G N K W S K I A S R L P G R T D N E I K N V W N T H L K K R L - -
 
AT1G16490.1     E T N L N A D E A G S K G S L N E E E N S Q E S S P N A S M S F A G S N I S S K D D D A Q I - - - - - - - - - - - - - -
gm021564_Glyma0    - - - - - - - - A P K K G S - - - E S S A D E S K P E S S I T S A S S - - S S S E S N Y Q L K I K W S R I Q K N K C P M
 
AT1G16490.1     - - - - - - - - - - - - - S Q M F E H - - - - - - - - - - - - I L T Y S E F T G M L Q E V D K P - E L L E M P F D L D P
gm021564_Glyma0    N L L T S L R I Q K V N T S Q I V E H K P E E E Q L A S P L P Y L G H Y D V G S M L E E V D K P N Q L I E I P W E P D Y
 
AT1G16490.1     D I W S F I D G S D S F Q Q P E N R A L Q - - - - - - - - - - - - - - E S E E D - E V D K W F K H L E S E L G L E E N D
gm021564_Glyma0    D F W K L L D D D N S L E S F Q S N E V Q L G E F P A I Q N I I L G E E S V H D A E A K K W S Q D F E N E F G V V - - -
 
AT1G16490.1     N Q Q Q Q Q Q H K Q G T E D E H S S S L L E S Y E L L I H
gm021564_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
0