fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G16530.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb000645 not found in 207aa AT1G31320.1 1st_not 0.463768115 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G16530.1     MRQK--------------GHRHGR--------TVSPCAGCKLLRRKCVKDSCVFAPYFPA
Sb000645_Sorbi1 MRDAVVVMAVPGAAAGAGGGKSGSGGGAGGAASAAPCAACKLLRRRCAA-GCVFAPYFPP
                **:               * : *         :.:***.******:*.  .********.

AT1G16530.1     KEPYKFAIVHKIFGASNVNKMLQELSENHRSDAVDSMVYEANARIQDPVYGCVGTISSLH
Sb000645_Sorbi1 GEPHKFANVHKVFGASNVSKLLQEIPVQHRGDAVSSLVYEANARVRDPVYGCVGAISSLQ
                 **:*** ***:******.*:***:. :**.***.*:*******::********:****:

AT1G16530.1     RQLETLQTQLAFAQAELIHIRT-----LHRIHTKP-------PPYTASTVTFPSNKDFYS
Sb000645_Sorbi1 QQVETLQAQLALAQAEMVRLRMSNDYILHRLKAASRANGGGGSSYTGSPSSMSSPKTAEP
                :*:****:***:****::::*      ***::: .       ..**.*. ::.* *   .

AT1G16530.1     D---------IDMAV--AYTDDAGDFLWSC
Sb000645_Sorbi1 EAHCNATPELLDMVVDQPSMDDA--HFWSY
                :         :**.*  .  ***  .:**
BoxShade v3.31 C (beta, 970507) Output
AT1G16530.1     M R Q K - - - - - - - - - - - - - - G H R H G R - - - - - - - - T V S P C A G C K L L R R K C V K D S C V F A P Y F P A
Sb000645_Sorbi1    M R D A V V V M A V P G A A A G A G G G K S G S G G G A G G A A S A A P C A A C K L L R R R C A A - G C V F A P Y F P P
 
AT1G16530.1     K E P Y K F A I V H K I F G A S N V N K M L Q E L S E N H R S D A V D S M V Y E A N A R I Q D P V Y G C V G T I S S L H
Sb000645_Sorbi1    G E P H K F A N V H K V F G A S N V S K L L Q E I P V Q H R G D A V S S L V Y E A N A R V R D P V Y G C V G A I S S L Q
 
AT1G16530.1     R Q L E T L Q T Q L A F A Q A E L I H I R T - - - - - L H R I H T K P - - - - - - - P P Y T A S T V T F P S N K D F Y S
Sb000645_Sorbi1    Q Q V E T L Q A Q L A L A Q A E M V R L R M S N D Y I L H R L K A A S R A N G G G G S S Y T G S P S S M S S P K T A E P
 
AT1G16530.1     D - - - - - - - - - I D M A V - - A Y T D D A G D F L W S C
Sb000645_Sorbi1    E A H C N A T P E L L D M V V D Q P S M D D A - - H F W S Y
 
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