fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G17520.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os003490 not found in 304aa AT1G17520.1 1st_1st 0.335834896 Ib
Sb025680 not found in 431aa AT1G17520.1 1st_1st 0.317073170 Ib
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G17520.1     ------------------MGNQKLKWTAEEEEALLAGVRKHGPGKWKNILRDPELAEQLS
Sb025680_Sorbi1 FGRRRAEDTGARRGGEQAMGAPKQKWTSEEEDALRAGVRKHGAGKWRTIQKDPEFSPVLS
Os003490_Os01t0 ------------------MGAPKQKWTSEEEEALRRGVLKHGPGKWRTIQKDPEFSPVLS
                                  **  * ***:***:**  ** ***.***:.* :***::  **

AT1G17520.1     SRSNIDLKDKWRNLSVAPGIQGSKDKIRTPKIKAAAFHLAAAAAA--AIVT-PTHSGHSS
Sb025680_Sorbi1 SRSNIDLKDKWRNLSFSASGLGS-SKVRVPRITGPTSSPSPSAQA--LLLPAPNKVTEAT
Os003490_Os01t0 SRSNIDLKDKWRNLSFSASGLGSRDKLKVPRIKGPSSSTSPSSQTPLLVLP-PNKVAEAS
                ***************.:..  ** .*::.*:*...:   :.:: :   ::. *.:  .::

AT1G17520.1     PVATLPRSGSSDLSIDDSFNIVVDPKNAPRYDGMIFEALSNLTDANGSDVSAIFNFIEQR
Sb025680_Sorbi1 LPADAEKKPQ-------------DGKTPPKYGVMIMEALSELNEPNGSDMAAILRFIEER
Os003490_Os01t0 PSADPEKSSQ-------------DVKIP---NSMVIEALCEIGDPNGSDVDAICHYIEQR
                  *   :. .             * * .   . *::***.:: :.****: ** .:**:*

AT1G17520.1     QEVPPNFRRMLSSRLRRLAAQGKLEKVSHLKSTQNFYKMNDNSL-----VQRTPHVARPK
Sb025680_Sorbi1 HVVQPTFRRFLTSKLRRLADSNKIVKID--KS----YRLPDSF------ATRTP---APK
Os003490_Os01t0 HEVQANFRRLLTAKLRRLIAAKKIEKID--RS----YRITESYAAKVSQANKSP---SPK
                : * ..***:*:::****    *: *:.  :*    *:: :.       . ::*    **

AT1G17520.1     -ESNTKSRQQTNSQGP-SISQQIVEASITAAYKLVEVENKLDVSKGAAEEIERLMKLAEE
Sb025680_Sorbi1 QKDPSKPSKVSKTIGLFTASSPALEAAMAAAVKVADAEAKAHDAHDQMMEAERILKMAED
Os003490_Os01t0 -KDPAKPLKASQNLGSFAGTSPALEAAAAAAMKVADAEAKSHLANEHMTEAERIFKLAEE
                 :. :*. : ::. *  : :.  :**: :** *:.:.* * . ::    * **::*:**:

AT1G17520.1     ADEMLVIAREMHEECSQGKIMYL---------------N----------
Sb025680_Sorbi1 TESLLTIAVEIYDRCLRGEITTI--VAQRDV------------------
Os003490_Os01t0 TESLVTLATEIYERCSRGEILTIMQVAQSNFEFQSVSGNGSGTGSTVLA
                ::.::.:* *:::.* :*:*  :
BoxShade v3.31 C (beta, 970507) Output
AT1G17520.1     - - - - - - - - - - - - - - - - - - M G N Q K L K W T A E E E E A L L A G V R K H G P G K W K N I L R D P E L A E Q L S
Sb025680_Sorbi1    F G R R R A E D T G A R R G G E Q A M G A P K Q K W T S E E E D A L R A G V R K H G A G K W R T I Q K D P E F S P V L S
Os003490_Os01t0    - - - - - - - - - - - - - - - - - - M G A P K Q K W T S E E E E A L R R G V L K H G P G K W R T I Q K D P E F S P V L S
 
AT1G17520.1     S R S N I D L K D K W R N L S V A P G I Q G S K D K I R T P K I K A A A F H L A A A A A A - - A I V T - P T H S G H S S
Sb025680_Sorbi1    S R S N I D L K D K W R N L S F S A S G L G S - S K V R V P R I T G P T S S P S P S A Q A - - L L L P A P N K V T E A T
Os003490_Os01t0    S R S N I D L K D K W R N L S F S A S G L G S R D K L K V P R I K G P S S S T S P S S Q T P L L V L P - P N K V A E A S
 
AT1G17520.1     P V A T L P R S G S S D L S I D D S F N I V V D P K N A P R Y D G M I F E A L S N L T D A N G S D V S A I F N F I E Q R
Sb025680_Sorbi1    L P A D A E K K P Q - - - - - - - - - - - - - D G K T P P K Y G V M I M E A L S E L N E P N G S D M A A I L R F I E E R
Os003490_Os01t0    P S A D P E K S S Q - - - - - - - - - - - - - D V K I P - - - N S M V I E A L C E I G D P N G S D V D A I C H Y I E Q R
 
AT1G17520.1     Q E V P P N F R R M L S S R L R R L A A Q G K L E K V S H L K S T Q N F Y K M N D N S L - - - - - V Q R T P H V A R P K
Sb025680_Sorbi1    H V V Q P T F R R F L T S K L R R L A D S N K I V K I D - - K S - - - - Y R L P D S F - - - - - - A T R T P - - - A P K
Os003490_Os01t0    H E V Q A N F R R L L T A K L R R L I A A K K I E K I D - - R S - - - - Y R I T E S Y A A K V S Q A N K S P - - - S P K
 
AT1G17520.1     - E S N T K S R Q Q T N S Q G P - S I S Q Q I V E A S I T A A Y K L V E V E N K L D V S K G A A E E I E R L M K L A E E
Sb025680_Sorbi1    Q K D P S K P S K V S K T I G L F T A S S P A L E A A M A A A V K V A D A E A K A H D A H D Q M M E A E R I L K M A E D
Os003490_Os01t0    - K D P A K P L K A S Q N L G S F A G T S P A L E A A A A A A M K V A D A E A K S H L A N E H M T E A E R I F K L A E E
 
AT1G17520.1     A D E M L V I A R E M H E E C S Q G K I M Y L - - - - - - - - - - - - - - - N - - - - - - - - - -
Sb025680_Sorbi1    T E S L L T I A V E I Y D R C L R G E I T T I - - V A Q R D V - - - - - - - - - - - - - - - - - -
Os003490_Os01t0    T E S L V T L A T E I Y E R C S R G E I L T I M Q V A Q S N F E F Q S V S G N G S G T G S T V L A
 
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