fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G17520.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt009112 not found in 279aa AT1G72740.2 1st_not 0.425891181 II
Pt005817 not found in 275aa AT1G17520.1 not_1st 0.405253283 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G17520.1     MGNQKLKWTAEEEEALLAGVRKHGPGKWKNILRDPELAEQLSSRSNIDLKDKWRNLSVAP
pt005817_POPTR_ MGNPKQKWTSEEEEALRAGVAKHGTGKWKNIQRDPEFNPYLYSRSNIDLKDKWRNMTVSA
pt009112_POPTR_ MGNPKQKWKSEEEEALRAGIAKHGTGKWKNIQRDPEFNPYLRSRSNIDLKDKWRNMTVSA
                *** * **.:****** **: ***.****** ****:   * *************::*:.

AT1G17520.1     GIQGSKDKIRTPKIKAAAFHLAAAAAAAIVTPTHSGHSSPVATLPRSGSSDLSIDDSFNI
pt005817_POPTR_ GSQSVKDKSRTTKVKSIP---DAA---AAATPLPNPQTSA-ASAAAAAAADVAIDDYSEA
pt009112_POPTR_ GSQSVKDKSRTLKAKSSP---DAAAVVAASTPLSNPHTS------AVAAVDVVIDDSSEA
                * *. *** ** * *: .    **   *  **  . ::*        .: *: ***  : 

AT1G17520.1     VVDPKNAPRYDGMIFEALSNLTDANGSDVSAIFNFIEQRQEVPPNFRRMLSSRLRRLAAQ
pt005817_POPTR_ AADSKTAPKYNAMIFEAISAFNEPNGADTSAIISYIEQRQELPQNFRRQLSSRLRRLVAQ
pt009112_POPTR_ AADSKTAPKYNAMIFEAISALNEPNGADTSAIISYIERRQELPQNFRRQLSSRLRRLVAQ
                ..*.*.**:*:.*****:* :.:.**:*.***:.:**:***:* **** ********.**

AT1G17520.1     GKLEKVSHLKSTQNFYKMND-NSLVQRTPHVARPKESNTKSRQQTNSQGPSISQQIVEAS
pt005817_POPTR_ EKLEKV------QNCYKIKKVSSFGTKTP---TPK-KEVRPKSVHDT-----GDTVEGAA
pt009112_POPTR_ EKLEKV------QNFYKIKKASSFGTKTP---TPKQKEVRPKPEQNTGLINSGDTVAEAA
                 *****      ** **::. .*:  :**    ** .:.:.:   ::     .: :  *:

AT1G17520.1     ITAAYKLVEVENKLDVSKGAAEEIERLMKLAEEADEMLVIAREMHEECSQGKIMYLN
pt005817_POPTR_ NDAAYSVAEAENKSFVATEAVKESERVSKMSEDADSLLQLANEILEKCLRGEIVIMG
pt009112_POPTR_ DDAAYMVAEAENKSFVATEAVKESERVSKMAEDANSLLQLANEILEKCLRGEIVVMG
                  *** :.*.***  *:. *.:* **: *::*:*:.:* :*.*: *:* :*:*: :.
BoxShade v3.31 C (beta, 970507) Output
AT1G17520.1     M G N Q K L K W T A E E E E A L L A G V R K H G P G K W K N I L R D P E L A E Q L S S R S N I D L K D K W R N L S V A P
pt005817_POPTR_    M G N P K Q K W T S E E E E A L R A G V A K H G T G K W K N I Q R D P E F N P Y L Y S R S N I D L K D K W R N M T V S A
pt009112_POPTR_    M G N P K Q K W K S E E E E A L R A G I A K H G T G K W K N I Q R D P E F N P Y L R S R S N I D L K D K W R N M T V S A
 
AT1G17520.1     G I Q G S K D K I R T P K I K A A A F H L A A A A A A A I V T P T H S G H S S P V A T L P R S G S S D L S I D D S F N I
pt005817_POPTR_    G S Q S V K D K S R T T K V K S I P - - - D A A - - - A A A T P L P N P Q T S A - A S A A A A A A A D V A I D D Y S E A
pt009112_POPTR_    G S Q S V K D K S R T L K A K S S P - - - D A A A V V A A S T P L S N P H T S - - - - - - A V A A V D V V I D D S S E A
 
AT1G17520.1     V V D P K N A P R Y D G M I F E A L S N L T D A N G S D V S A I F N F I E Q R Q E V P P N F R R M L S S R L R R L A A Q
pt005817_POPTR_    A A D S K T A P K Y N A M I F E A I S A F N E P N G A D T S A I I S Y I E Q R Q E L P Q N F R R Q L S S R L R R L V A Q
pt009112_POPTR_    A A D S K T A P K Y N A M I F E A I S A L N E P N G A D T S A I I S Y I E R R Q E L P Q N F R R Q L S S R L R R L V A Q
 
AT1G17520.1     G K L E K V S H L K S T Q N F Y K M N D - N S L V Q R T P H V A R P K E S N T K S R Q Q T N S Q G P S I S Q Q I V E A S
pt005817_POPTR_    E K L E K V - - - - - - Q N C Y K I K K V S S F G T K T P - - - T P K - K E V R P K S V H D T - - - - - G D T V E G A A
pt009112_POPTR_    E K L E K V - - - - - - Q N F Y K I K K A S S F G T K T P - - - T P K Q K E V R P K P E Q N T G L I N S G D T V A E A A
 
AT1G17520.1     I T A A Y K L V E V E N K L D V S K G A A E E I E R L M K L A E E A D E M L V I A R E M H E E C S Q G K I M Y L N
pt005817_POPTR_    N D A A Y S V A E A E N K S F V A T E A V K E S E R V S K M S E D A D S L L Q L A N E I L E K C L R G E I V I M G
pt009112_POPTR_    D D A A Y M V A E A E N K S F V A T E A V K E S E R V S K M A E D A N S L L Q L A N E I L E K C L R G E I V V M G
 
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