fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G17520.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb025680 not found in 431aa AT1G17520.1 1st_1st 0.317073170 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G17520.1     ------------------MGNQKLKWTAEEEEALLAGVRKHGPGKWKNILRDPELAEQLS
Sb025680_Sorbi1 FGRRRAEDTGARRGGEQAMGAPKQKWTSEEEDALRAGVRKHGAGKWRTIQKDPEFSPVLS
                                  **  * ***:***:** *******.***:.* :***::  **

AT1G17520.1     SRSNIDLKDKWRNLSVAPGIQGSKDKIRTPKIKAAAFHLAAAAAAAIVTPTHSGHSSPVA
Sb025680_Sorbi1 SRSNIDLKDKWRNLSFSASGLGSS-KVRVPRITGPTSS-PSPSAQALLLPAPNKVTE--A
                ***************.:..  **. *:*.*:*...:   .:.:* *:: *: .  :.  *

AT1G17520.1     TLPRSGSSDLSIDDSFNIVVDPKNAPRYDGMIFEALSNLTDANGSDVSAIFNFIEQRQEV
Sb025680_Sorbi1 TLPA---------DAEKKPQDGKTPPKYGVMIMEALSELNEPNGSDMAAILRFIEERHVV
                ***          *: :   * *..*:*. **:****:*.:.****::**:.***:*: *

AT1G17520.1     PPNFRRMLSSRLRRLAAQGKLEKVSHLKSTQNFYKMNDNSLVQRTPHVARPKESN-TKSR
Sb025680_Sorbi1 QPTFRRFLTSKLRRLADSNKIVKID--KS----YRLPD-SFATRTP---APKQKDPSKPS
                 *.***:*:*:***** ..*: *:.  **    *:: * *:. ***    **:.: :*. 

AT1G17520.1     QQTNSQGP-SISQQIVEASITAAYKLVEVENKLDVSKGAAEEIERLMKLAEEADEMLVIA
Sb025680_Sorbi1 KVSKTIGLFTASSPALEAAMAAAVKVADAEAKAHDAHDQMMEAERILKMAEDTESLLTIA
                : ::: *  : *.  :**:::** *:.:.* * . ::.   * **::*:**:::.:*.**

AT1G17520.1     REMHEECSQGKIMYLN-----
Sb025680_Sorbi1 VEIYDRCLRGEITTIVAQRDV
                 *:::.* :*:*  :
BoxShade v3.31 C (beta, 970507) Output
AT1G17520.1     - - - - - - - - - - - - - - - - - - M G N Q K L K W T A E E E E A L L A G V R K H G P G K W K N I L R D P E L A E Q L S
Sb025680_Sorbi1    F G R R R A E D T G A R R G G E Q A M G A P K Q K W T S E E E D A L R A G V R K H G A G K W R T I Q K D P E F S P V L S
 
AT1G17520.1     S R S N I D L K D K W R N L S V A P G I Q G S K D K I R T P K I K A A A F H L A A A A A A A I V T P T H S G H S S P V A
Sb025680_Sorbi1    S R S N I D L K D K W R N L S F S A S G L G S S - K V R V P R I T G P T S S - P S P S A Q A L L L P A P N K V T E - - A
 
AT1G17520.1     T L P R S G S S D L S I D D S F N I V V D P K N A P R Y D G M I F E A L S N L T D A N G S D V S A I F N F I E Q R Q E V
Sb025680_Sorbi1    T L P A - - - - - - - - - D A E K K P Q D G K T P P K Y G V M I M E A L S E L N E P N G S D M A A I L R F I E E R H V V
 
AT1G17520.1     P P N F R R M L S S R L R R L A A Q G K L E K V S H L K S T Q N F Y K M N D N S L V Q R T P H V A R P K E S N - T K S R
Sb025680_Sorbi1    Q P T F R R F L T S K L R R L A D S N K I V K I D - - K S - - - - Y R L P D - S F A T R T P - - - A P K Q K D P S K P S
 
AT1G17520.1     Q Q T N S Q G P - S I S Q Q I V E A S I T A A Y K L V E V E N K L D V S K G A A E E I E R L M K L A E E A D E M L V I A
Sb025680_Sorbi1    K V S K T I G L F T A S S P A L E A A M A A A V K V A D A E A K A H D A H D Q M M E A E R I L K M A E D T E S L L T I A
 
AT1G17520.1     R E M H E E C S Q G K I M Y L N - - - - -
Sb025680_Sorbi1    V E I Y D R C L R G E I T T I V A Q R D V
 
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