fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G17520.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm021824 not found in 281aa AT1G17520.1 1st_1st 0.416510318 Ia
Gm016988 not found in 285aa AT1G72740.2 not_not 0.407129455 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G17520.1     MGNQKLKWTAEEEEALLAGVRKHGPGKWKNILRDPELAEQLSSRSNIDLKDKWRNLSVAP
gm016988_Glyma0 MGNQKQKWTQDEEDALIAGVEKHGPGKWKNILKDPQFAPFLTSRSNIDLKDKWRNLSVSN
gm021824_Glyma0 MGNQKQKWTQDEEDALIAGVEKHGPGKWKNILKDPQFAPFLTSRSNIDLKDKWRNLSVSN
                ***** *** :**:**:***.***********:**::*  *:****************: 

AT1G17520.1     GIQGSKDKIRTPKIKAAAFHLAAAAA--AAIVTPTHSGHSSPVATLPRSGSSDLS-IDDS
gm016988_Glyma0 GAQGSKEKSRVPKPKA----FSAPPATTATTATPQ---NASPA---PQSASSDAAVAPDA
gm021824_Glyma0 GAQGSKEKSRVPKLKA----LPAPP---APTATPQ---NAAPA---LQNAASDVT-PPDA
                * ****:* *.** **    :.*..   *. .**    :::*.    :..:** :   *:

AT1G17520.1     FNIVVDPKNAPRYDGMIFEALSNLTDANGSDVSAIFNFIEQRQ-EVPPNFRRMLSSRLRR
gm016988_Glyma0 SQNDQDAKNPPRYNALIFEALSALKDSNGSDMNAIIKFMEQKNHQVNQNFKRALSTRLRR
gm021824_Glyma0 SQNDQDAKNPPRYNAMIFEALSALKDSNGSDMNAIIKFMEQKNLQVNQNFRRALSTKLRR
                 :   *.**.***:.:****** *.*:****:.**::*:**:: :*  **:* **::***

AT1G17520.1     LAAQGKLEKVSHLKSTQNFYKM-NDNSLVQRTPHVARPKESNTKSRQQTNSQGPS----I
gm016988_Glyma0 LVSQGKLEKV------PNGYKVKKEASSGTKSP---SPKAKDVRP-PQPQRQSPASLFMT
gm021824_Glyma0 LVSQGKLEKV------QNGYKVKKEASSGTKSP---SPKPKDVRP-PQPQQQSPASVLMT
                *.:*******       * **: :: *   ::*    ** .:.:.  *.: *.*:     

AT1G17520.1     SQQIVEASITAAYKLVEVENKLDVSKGAAEEIERLMKLAEEADEMLVIAREMHEECSQGK
gm016988_Glyma0 NDTLKEAADTAAYRVADAESKSYLAAEAVKEAEKISLLVEHSDSMLQLAKDIYEQCSRGE
gm021824_Glyma0 NDTIKEAADTAAYRVADAESKSYLAAEAVKEAEKISLLVEHSDSMLQLAKDIYEQCSRGE
                .: : **: ****::.:.*.*  ::  *.:* *::  *.*.:*.** :*::::*:**:*:

AT1G17520.1     IMYLN
gm016988_Glyma0 IILLA
gm021824_Glyma0 IILLA
                *: *
BoxShade v3.31 C (beta, 970507) Output
AT1G17520.1     M G N Q K L K W T A E E E E A L L A G V R K H G P G K W K N I L R D P E L A E Q L S S R S N I D L K D K W R N L S V A P
gm016988_Glyma0    M G N Q K Q K W T Q D E E D A L I A G V E K H G P G K W K N I L K D P Q F A P F L T S R S N I D L K D K W R N L S V S N
gm021824_Glyma0    M G N Q K Q K W T Q D E E D A L I A G V E K H G P G K W K N I L K D P Q F A P F L T S R S N I D L K D K W R N L S V S N
 
AT1G17520.1     G I Q G S K D K I R T P K I K A A A F H L A A A A A - - A A I V T P T H S G H S S P V A T L P R S G S S D L S - I D D S
gm016988_Glyma0    G A Q G S K E K S R V P K P K A - - - - F S A P P A T T A T T A T P Q - - - N A S P A - - - P Q S A S S D A A V A P D A
gm021824_Glyma0    G A Q G S K E K S R V P K L K A - - - - L P A P P - - - A P T A T P Q - - - N A A P A - - - L Q N A A S D V T - P P D A
 
AT1G17520.1     F N I V V D P K N A P R Y D G M I F E A L S N L T D A N G S D V S A I F N F I E Q R Q - E V P P N F R R M L S S R L R R
gm016988_Glyma0    S Q N D Q D A K N P P R Y N A L I F E A L S A L K D S N G S D M N A I I K F M E Q K N H Q V N Q N F K R A L S T R L R R
gm021824_Glyma0    S Q N D Q D A K N P P R Y N A M I F E A L S A L K D S N G S D M N A I I K F M E Q K N L Q V N Q N F R R A L S T K L R R
 
AT1G17520.1     L A A Q G K L E K V S H L K S T Q N F Y K M - N D N S L V Q R T P H V A R P K E S N T K S R Q Q T N S Q G P S - - - - I
gm016988_Glyma0    L V S Q G K L E K V - - - - - - P N G Y K V K K E A S S G T K S P - - - S P K A K D V R P - P Q P Q R Q S P A S L F M T
gm021824_Glyma0    L V S Q G K L E K V - - - - - - Q N G Y K V K K E A S S G T K S P - - - S P K P K D V R P - P Q P Q Q Q S P A S V L M T
 
AT1G17520.1     S Q Q I V E A S I T A A Y K L V E V E N K L D V S K G A A E E I E R L M K L A E E A D E M L V I A R E M H E E C S Q G K
gm016988_Glyma0    N D T L K E A A D T A A Y R V A D A E S K S Y L A A E A V K E A E K I S L L V E H S D S M L Q L A K D I Y E Q C S R G E
gm021824_Glyma0    N D T I K E A A D T A A Y R V A D A E S K S Y L A A E A V K E A E K I S L L V E H S D S M L Q L A K D I Y E Q C S R G E
 
AT1G17520.1     I M Y L N
gm016988_Glyma0    I I L L A
gm021824_Glyma0    I I L L A
 
0