fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G17950.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb020348 not found in 317aa AT1G73410.1 1st_not 0.447619047 II
Gm025122 not found in 237aa AT1G17950.1 not_1st 0.48 II
Gm014930 not found in 258aa AT1G17950.1 not_1st 0.407619047 II
Pt026619 not found in 214aa AT1G17950.1 not_1st 0.495238095 II
Pt036337 not found in 247aa AT1G17950.1 not_1st 0.472380952 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G17950.1     ----------MMCSRGHWRPAEDEKLRELVEQFGPHNWNAIAQKLSGRSGKSCRLRWFNQ
gm025122_Glyma0 -----------MCSRGHWRPAEDEKLRELVERYGPHNWNAIAEKLRGRSGKSCRLRWFNQ
pt036337_POPTR_ -----------MSSRGHWRLAEDEKLLELVEQYGPHNWNSIAEKLQGRSGKSCRLRWFNQ
pt026619_POPTR_ -----------MCTRGHWRPAEDEKLKELVEKYGPHNWNAIAEKLHGRSGKSCRLRWFNQ
gm014930_Glyma0 MEDSSAGEDTKTCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQ
Sb020348_Sorbi1 -----------MCTRGHWRPSEDEKLKELVALYGPHNWNAIAEKLQGRSGKSCRLRWFNQ
                            ..***** :***** :**  :*.:***:**:** **************

AT1G17950.1     LDPRINRNPFTEEEEERLLASHRIHGNRWSVIARFFPGRTDNAVKNHWHVIMARRGRERS
gm025122_Glyma0 LDPRINRSPFTEEEEERLLASHRIHGNRWAVIARHFPGRTDNAVKNHWHVMMARIRRERS
pt036337_POPTR_ LDPRINRSPFTEEEEERLLACHRIHGNKWAVIAKQFPGRTDNAVKNHWHVIMARRCRERS
pt026619_POPTR_ LDPRINRSPFTEEEEERLLASHRIHGNRWAVIARLFPGRTDNAVKNHWHVIMARRYRERS
gm014930_Glyma0 LDPRINRRPFTEEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQREQS
Sb020348_Sorbi1 LDPRINRSPFSEEEEELLLASHRVHGNRWAVIARLFPGRTDNAVKNHWHVIMARRCRERM
                ******* **:***** ***.**:***:*::**: ***************:***  **: 

AT1G17950.1     KLRPR---GLGHDGTVAATGMIGNYK-----------------------DCDKER-----
gm025122_Glyma0 KN---------YSPKQPLF------PPN-LQVDLET-------------NFE--------
pt036337_POPTR_ KI---------HAKRASPSLLVNEQKPSFSNQDVRI------------MNCEP-R-----
pt026619_POPTR_ RL---------HAKRTAQA-LVNEQKFS-SKQDMQI-------------NCE--------
gm014930_Glyma0 KLCGKR-----------------------SFQDCQILPLVILWRLGILVLCQPPPPKERE
Sb020348_Sorbi1 RLSNRRGGGAAGAAVAGAGAVEDDNNPR---------------------NAKKPRPD---
                :                                                  .        

AT1G17950.1     ---RLATTTAINFPY-QFSH------INHFQV--LKEF--LTGKIGFRNSTTPIQEGAID
gm025122_Glyma0 ----TIPSFVDKYYE-KYSHPCVPLTHSSFQFP-TKNF-------YFQDPSS-------A
pt036337_POPTR_ ---NNAPSFVHKYFE-SY---C-----DHYHHPFTRNYTSICKDLYSQNPSH------CE
pt026619_POPTR_ ----------------------------------TRSFSSFLLLLMFLTYMA------IA
gm014930_Glyma0 TISITLLVLLVIYPNPAFS---------------LPNYKRVV-------PTSPLIST-FL
Sb020348_Sorbi1 --ASSMASLLDKYRR-EFS--VVPFAINHNSN--QQDY--------------------CS
                                                    .:                      

AT1G17950.1     QTKRP------MEFYNFLQVNTDSKI--HELIDNSRKDEEEDVDQNNRI---PNENCVPF
gm025122_Glyma0 GSTVPRDNCESVEFYDFLQVNTDSNK--SEVTDNARRDEEE-VSQDAVGMK-NKDNGVPF
pt036337_POPTR_ GKNQP------LEFYDFLQVKTESSK--SEVIDNARRDDVE-VDQEAKELP-KSRAGFPF
pt026619_POPTR_ DQNRP------IEFYDFLQVNTESNK--SEVIDNARREDEE-VDQREVILEHQSKAGVPF
gm014930_Glyma0 GSSDH-DGRIKKDLMSFCDNNTNSSSTFTKLKASTEKDQQQ-TNEDETNN--IKPKEVPF
Sb020348_Sorbi1 TTNEA-DTNKSVEFYDFLQVNANSSD--TKCGSSIEEQEEN-RDD-------QAEGQVQF
                  .         :: .* : :::*.    :   . ..:: :  .:            . *

AT1G17950.1     FDFLSVGNSASQGLC
gm025122_Glyma0 IDFLSTGGC------
pt036337_POPTR_ IDFLSAGNQVS-GL-
pt026619_POPTR_ IDFFSA---------
gm014930_Glyma0 IDFLGVGV-------
Sb020348_Sorbi1 IDFLEVGASHRQ---
                :**: .
BoxShade v3.31 C (beta, 970507) Output
AT1G17950.1     - - - - - - - - - - M M C S R G H W R P A E D E K L R E L V E Q F G P H N W N A I A Q K L S G R S G K S C R L R W F N Q
gm025122_Glyma0    - - - - - - - - - - - M C S R G H W R P A E D E K L R E L V E R Y G P H N W N A I A E K L R G R S G K S C R L R W F N Q
pt036337_POPTR_    - - - - - - - - - - - M S S R G H W R L A E D E K L L E L V E Q Y G P H N W N S I A E K L Q G R S G K S C R L R W F N Q
pt026619_POPTR_    - - - - - - - - - - - M C T R G H W R P A E D E K L K E L V E K Y G P H N W N A I A E K L H G R S G K S C R L R W F N Q
gm014930_Glyma0    M E D S S A G E D T K T C P R G H W R P A E D E K L R Q L V E Q Y G A Q N W N S I A E K L Q G R S G K S C R L R W F N Q
Sb020348_Sorbi1    - - - - - - - - - - - M C T R G H W R P S E D E K L K E L V A L Y G P H N W N A I A E K L Q G R S G K S C R L R W F N Q
 
AT1G17950.1     L D P R I N R N P F T E E E E E R L L A S H R I H G N R W S V I A R F F P G R T D N A V K N H W H V I M A R R G R E R S
gm025122_Glyma0    L D P R I N R S P F T E E E E E R L L A S H R I H G N R W A V I A R H F P G R T D N A V K N H W H V M M A R I R R E R S
pt036337_POPTR_    L D P R I N R S P F T E E E E E R L L A C H R I H G N K W A V I A K Q F P G R T D N A V K N H W H V I M A R R C R E R S
pt026619_POPTR_    L D P R I N R S P F T E E E E E R L L A S H R I H G N R W A V I A R L F P G R T D N A V K N H W H V I M A R R Y R E R S
gm014930_Glyma0    L D P R I N R R P F T E E E E E R L L A A H R I H G N K W A L I A R L F P G R T D N A V K N H W H V I M A R K Q R E Q S
Sb020348_Sorbi1    L D P R I N R S P F S E E E E E L L L A S H R V H G N R W A V I A R L F P G R T D N A V K N H W H V I M A R R C R E R M
 
AT1G17950.1     K L R P R - - - G L G H D G T V A A T G M I G N Y K - - - - - - - - - - - - - - - - - - - - - - - D C D K E R - - - - -
gm025122_Glyma0    K N - - - - - - - - - Y S P K Q P L F - - - - - - P P N - L Q V D L E T - - - - - - - - - - - - - N F E - - - - - - - -
pt036337_POPTR_    K I - - - - - - - - - H A K R A S P S L L V N E Q K P S F S N Q D V R I - - - - - - - - - - - - M N C E P - R - - - - -
pt026619_POPTR_    R L - - - - - - - - - H A K R T A Q A - L V N E Q K F S - S K Q D M Q I - - - - - - - - - - - - - N C E - - - - - - - -
gm014930_Glyma0    K L C G K R - - - - - - - - - - - - - - - - - - - - - - - S F Q D C Q I L P L V I L W R L G I L V L C Q P P P P K E R E
Sb020348_Sorbi1    R L S N R R G G G A A G A A V A G A G A V E D D N N P R - - - - - - - - - - - - - - - - - - - - - N A K K P R P D - - -
 
AT1G17950.1     - - - R L A T T T A I N F P Y - Q F S H - - - - - - I N H F Q V - - L K E F - - L T G K I G F R N S T T P I Q E G A I D
gm025122_Glyma0    - - - - T I P S F V D K Y Y E - K Y S H P C V P L T H S S F Q F P - T K N F - - - - - - - Y F Q D P S S - - - - - - - A
pt036337_POPTR_    - - - N N A P S F V H K Y F E - S Y - - - C - - - - - D H Y H H P F T R N Y T S I C K D L Y S Q N P S H - - - - - - C E
pt026619_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - T R S F S S F L L L L M F L T Y M A - - - - - - I A
gm014930_Glyma0    T I S I T L L V L L V I Y P N P A F S - - - - - - - - - - - - - - - L P N Y K R V V - - - - - - - P T S P L I S T - F L
Sb020348_Sorbi1    - - A S S M A S L L D K Y R R - E F S - - V V P F A I N H N S N - - Q Q D Y - - - - - - - - - - - - - - - - - - - - C S
 
AT1G17950.1     Q T K R P - - - - - - M E F Y N F L Q V N T D S K I - - H E L I D N S R K D E E E D V D Q N N R I - - - P N E N C V P F
gm025122_Glyma0    G S T V P R D N C E S V E F Y D F L Q V N T D S N K - - S E V T D N A R R D E E E - V S Q D A V G M K - N K D N G V P F
pt036337_POPTR_    G K N Q P - - - - - - L E F Y D F L Q V K T E S S K - - S E V I D N A R R D D V E - V D Q E A K E L P - K S R A G F P F
pt026619_POPTR_    D Q N R P - - - - - - I E F Y D F L Q V N T E S N K - - S E V I D N A R R E D E E - V D Q R E V I L E H Q S K A G V P F
gm014930_Glyma0    G S S D H - D G R I K K D L M S F C D N N T N S S S T F T K L K A S T E K D Q Q Q - T N E D E T N N - - I K P K E V P F
Sb020348_Sorbi1    T T N E A - D T N K S V E F Y D F L Q V N A N S S D - - T K C G S S I E E Q E E N - R D D - - - - - - - Q A E G Q V Q F
 
AT1G17950.1     F D F L S V G N S A S Q G L C
gm025122_Glyma0    I D F L S T G G C - - - - - -
pt036337_POPTR_    I D F L S A G N Q V S - G L -
pt026619_POPTR_    I D F F S A - - - - - - - - -
gm014930_Glyma0    I D F L G V G V - - - - - - -
Sb020348_Sorbi1    I D F L E V G A S H R Q - - -
 
0