fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G17950.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm010780 not found in 297aa AT1G73410.1 not_not 0.4 III
Pt026618 not found in 236aa AT1G73410.1 not_not 0.483809523 III
Pt003784 not found in 241aa AT1G73410.1 not_not 0.464761904 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G17950.1     ----------MMCSRGHWRPAEDEKLRELVEQFGPHNWNAIAQKLSGRSGKSCRLRWFNQ
pt003784_POPTR_ -----------MSTRGHWRPAEDEKLRKLVDQYGPHNWNSIAEKLQGKSGKSCRLRWFNQ
pt026618_POPTR_ -----------MCTRGHWRPAEDEKLKELVEKYGPHNWNAIAEKLHGRSGKSCRLRWFNQ
gm010780_Glyma0 MEDSSAGEDTRTCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQ
                            ..************::**:::*.:***:**:** *:************

AT1G17950.1     LDPRINRNPFTEEEEERLLASHRIHGNRWSVIARFFPGRTDNAVKNHWHVIMARRGRERS
pt003784_POPTR_ LDPRINRSPFTEEEEERLLACQQIHGNKWAVIAKQFPGRTDNAVKNHWHIIMARKCRERS
pt026618_POPTR_ LDPRINRSPFTEEEEERLLASHRIHGNRWAVIARLFPGRTDNAVKNHWHVIMARRYRERS
gm010780_Glyma0 LDPRINRRPFTEEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQREQS
                ******* ************.::****:*::**: **************:****: **:*

AT1G17950.1     KLRPRGLGHDGTVAATGMIGNYK---------------------DCDKERRLA-------
pt003784_POPTR_ RI------HAKRAASQALLVNEQTHSFSNQDVMR--------IVNCEP-RNLA-------
pt026618_POPTR_ RL------HAKRTA-QA-LVNEQKFS-SKQDMQ----------INCET-RSFS-------
gm010780_Glyma0 KL------YMLFSTTRFGLENGRFFDFRSLDNNKDDDNNYRIVSDTTSSTSLASWNFASV
                ::      :    :    : * :                     :      ::       

AT1G17950.1     ---TTTAINFPYQF--------SHINHFQV-----------------LKEF-LTGKIGFR
pt003784_POPTR_ ---PSFFHKFCE----------SYCDCYH-------------------RPFCLNYPTSFC
pt026618_POPTR_ ----SFVKKYCEKFGQYPLITHSYLPAFW-------------------KEF-YNDDLSNC
gm010780_Glyma0 PTTTSTTTKGARDYFNTSRSSSVYLSEIYPNPAFSLPNYKRVVPTSPFRTF-LGS-----
                    :   :              :                        : *         

AT1G17950.1     NSTTPIQEGAIDQTKRPMEFYNFLQVNTDSKIHELIDNSRKDEEEDVDQNNR-----IPN
pt003784_POPTR_ NENTSHHEG------KPLEFYDFLQVKTDSSKSEALDNARRDDVE-VDQEAREL---HQR
pt026618_POPTR_ KD-----QN------RPIEFYDFLQVNTESNKSEVIDNARREDEE-VDQ--REVILEHQS
gm010780_Glyma0 ---SDHHDGWIIK-RDLMSFCDNNNNNSSSTFSKLKASTEKDHQQ--QQTNEDAT--NVE
                       :.        :.* :  : ::.*.  :   .:.::. :  :*  .        

AT1G17950.1     ENCVPFFDFLSVGNSASQGLC
pt003784_POPTR_ KANFPFIDFLSAGNSN-----
pt026618_POPTR_ KAGVPFIDFFSA---------
gm010780_Glyma0 PKEVPFIDFLGVGVSSS----
                   .**:**:..
BoxShade v3.31 C (beta, 970507) Output
AT1G17950.1     - - - - - - - - - - M M C S R G H W R P A E D E K L R E L V E Q F G P H N W N A I A Q K L S G R S G K S C R L R W F N Q
pt003784_POPTR_    - - - - - - - - - - - M S T R G H W R P A E D E K L R K L V D Q Y G P H N W N S I A E K L Q G K S G K S C R L R W F N Q
pt026618_POPTR_    - - - - - - - - - - - M C T R G H W R P A E D E K L K E L V E K Y G P H N W N A I A E K L H G R S G K S C R L R W F N Q
gm010780_Glyma0    M E D S S A G E D T R T C P R G H W R P A E D E K L R Q L V E Q Y G A Q N W N S I A E K L Q G R S G K S C R L R W F N Q
 
AT1G17950.1     L D P R I N R N P F T E E E E E R L L A S H R I H G N R W S V I A R F F P G R T D N A V K N H W H V I M A R R G R E R S
pt003784_POPTR_    L D P R I N R S P F T E E E E E R L L A C Q Q I H G N K W A V I A K Q F P G R T D N A V K N H W H I I M A R K C R E R S
pt026618_POPTR_    L D P R I N R S P F T E E E E E R L L A S H R I H G N R W A V I A R L F P G R T D N A V K N H W H V I M A R R Y R E R S
gm010780_Glyma0    L D P R I N R R P F T E E E E E R L L A A H R I H G N K W A L I A R L F P G R T D N A V K N H W H V I M A R K Q R E Q S
 
AT1G17950.1     K L R P R G L G H D G T V A A T G M I G N Y K - - - - - - - - - - - - - - - - - - - - - D C D K E R R L A - - - - - - -
pt003784_POPTR_    R I - - - - - - H A K R A A S Q A L L V N E Q T H S F S N Q D V M R - - - - - - - - I V N C E P - R N L A - - - - - - -
pt026618_POPTR_    R L - - - - - - H A K R T A - Q A - L V N E Q K F S - S K Q D M Q - - - - - - - - - - I N C E T - R S F S - - - - - - -
gm010780_Glyma0    K L - - - - - - Y M L F S T T R F G L E N G R F F D F R S L D N N K D D D N N Y R I V S D T T S S T S L A S W N F A S V
 
AT1G17950.1     - - - T T T A I N F P Y Q F - - - - - - - - S H I N H F Q V - - - - - - - - - - - - - - - - - L K E F - L T G K I G F R
pt003784_POPTR_    - - - P S F F H K F C E - - - - - - - - - - S Y C D C Y H - - - - - - - - - - - - - - - - - - - R P F C L N Y P T S F C
pt026618_POPTR_    - - - - S F V K K Y C E K F G Q Y P L I T H S Y L P A F W - - - - - - - - - - - - - - - - - - - K E F - Y N D D L S N C
gm010780_Glyma0    P T T T S T T T K G A R D Y F N T S R S S S V Y L S E I Y P N P A F S L P N Y K R V V P T S P F R T F - L G S - - - - -
 
AT1G17950.1     N S T T P I Q E G A I D Q T K R P M E F Y N F L Q V N T D S K I H E L I D N S R K D E E E D V D Q N N R - - - - - I P N
pt003784_POPTR_    N E N T S H H E G - - - - - - K P L E F Y D F L Q V K T D S S K S E A L D N A R R D D V E - V D Q E A R E L - - - H Q R
pt026618_POPTR_    K D - - - - - Q N - - - - - - R P I E F Y D F L Q V N T E S N K S E V I D N A R R E D E E - V D Q - - R E V I L E H Q S
gm010780_Glyma0    - - - S D H H D G W I I K - R D L M S F C D N N N N N S S S T F S K L K A S T E K D H Q Q - - Q Q T N E D A T - - N V E
 
AT1G17950.1     E N C V P F F D F L S V G N S A S Q G L C
pt003784_POPTR_    K A N F P F I D F L S A G N S N - - - - -
pt026618_POPTR_    K A G V P F I D F F S A - - - - - - - - -
gm010780_Glyma0    P K E V P F I D F L G V G V S S S - - - -
 
0