fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G17950.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os014652 not found in 245aa AT1G17950.1 1st_1st 0.44 Ia
Gm045477 not found in 234aa AT1G17950.1 1st_1st 0.487619047 Ia
Pt023852 not found in 243aa AT1G17950.1 1st_1st 0.508571428 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G17950.1     MMCSRGHWRPAEDEKLRELVEQFGPHNWNAIAQKLSGRSGKSCRLRWFNQLDPRINRNPF
gm045477_Glyma1 -MCSRGHWRPAEDEKLRELVEHYGPHNWNAIAEKLRGRSGKSCRLRWFNQLDPRINRNPF
pt023852_POPTR_ -MCTRGHWRPAEDEKLKELVEKYGPHNWNAIAEKLQGRSGKSCRLRWFNQLDPRINRSPF
Os014652_Os03t0 -MCTRGHWRPSEDEKLKELVARYGPHNWNAIAEKLQGRSGKSCRLRWFNQLDPRINRSPF
                 **:******:*****:*** ::*********:** *********************.**

AT1G17950.1     TEEEEERLLASHRIHGNRWSVIARFFPGRTDNAVKNHWHVIMARRGRERSKLR----PRG
gm045477_Glyma1 TEEEEERLLASHRIHGNRWAVIARHFPGRTDNAVKNHWHVMMARIRRERSKINNPK-LQP
pt023852_POPTR_ TEEEEERLLASHRIHGNRWAIIARFFPGRTDNAVKNHWHVIMARRYRERSRLHAKRAAQT
Os014652_Os03t0 TEEEEELLLASHRAHGNRWAVIARLFPGRTDNAVKNHWHVIMARRCRERMRLSNRR----
                ****** ****** *****::*** ***************:***  *** ::        

AT1G17950.1     LGHDGTVAATGMIGNYKDCDKERR-------------------LATTTAINFPYQF----
gm045477_Glyma1 LFAPN-----------LKDDLEA---------------------IPSFVEKYYEKY-SHP
pt023852_POPTR_ LVNDNKLSSK---QDHMHMDCETR-------------------NFSSFSKKYCEKYGQYP
Os014652_Os03t0 ----GGAAAA---GAAKGDESPARISNGEKTATRPPATNGSGMAMASLLDKYRREC----
                    .              :                         .:   ::  :     

AT1G17950.1     ----SHINHFQVLKEFLTGKIGFRNSTTPIQEGAIDQTKRPMEFYNFLQVNTDSKIH---
gm045477_Glyma1 CVTLTHSSFQFPGKKFYFQDPSSAGSTVP------PGKSQSVEFYDFLQVNTDSNES---
pt023852_POPTR_ MV--THSYLPAFCKEFYNEDPSHCED-----------QSRPIEFYDFLQVNTDSNKS---
Os014652_Os03t0 ----GAAGLFAIGRH-HNSKEDYCSSTN-------EDTSKSVEFYDFLQVNASSSDTKCG
                             :.    . .   .            .:.:***:*****:.*.     

AT1G17950.1     ----ELIDNSRKDEEEDVDQNNRIPNENC---VPFFDFLSVGNSASQGLC
gm045477_Glyma1 ----EVTDNARRDDEE-VSQDAVGQKNKDNG-VPFIDFLSTGGC------
pt023852_POPTR_ ----EVIDNARRDDEE-VDQQEALENNQSKADVPFIDFFSVNGKSSS---
Os014652_Os03t0 SSIEEQEDN--RDDDQAEGQ------------VQLIDFMEVGTTSRQ---
                    *  **  :*:::  .*            * ::**:...
BoxShade v3.31 C (beta, 970507) Output
AT1G17950.1     M M C S R G H W R P A E D E K L R E L V E Q F G P H N W N A I A Q K L S G R S G K S C R L R W F N Q L D P R I N R N P F
gm045477_Glyma1    - M C S R G H W R P A E D E K L R E L V E H Y G P H N W N A I A E K L R G R S G K S C R L R W F N Q L D P R I N R N P F
pt023852_POPTR_    - M C T R G H W R P A E D E K L K E L V E K Y G P H N W N A I A E K L Q G R S G K S C R L R W F N Q L D P R I N R S P F
Os014652_Os03t0    - M C T R G H W R P S E D E K L K E L V A R Y G P H N W N A I A E K L Q G R S G K S C R L R W F N Q L D P R I N R S P F
 
AT1G17950.1     T E E E E E R L L A S H R I H G N R W S V I A R F F P G R T D N A V K N H W H V I M A R R G R E R S K L R - - - - P R G
gm045477_Glyma1    T E E E E E R L L A S H R I H G N R W A V I A R H F P G R T D N A V K N H W H V M M A R I R R E R S K I N N P K - L Q P
pt023852_POPTR_    T E E E E E R L L A S H R I H G N R W A I I A R F F P G R T D N A V K N H W H V I M A R R Y R E R S R L H A K R A A Q T
Os014652_Os03t0    T E E E E E L L L A S H R A H G N R W A V I A R L F P G R T D N A V K N H W H V I M A R R C R E R M R L S N R R - - - -
 
AT1G17950.1     L G H D G T V A A T G M I G N Y K D C D K E R R - - - - - - - - - - - - - - - - - - - L A T T T A I N F P Y Q F - - - -
gm045477_Glyma1    L F A P N - - - - - - - - - - - L K D D L E A - - - - - - - - - - - - - - - - - - - - - I P S F V E K Y Y E K Y - S H P
pt023852_POPTR_    L V N D N K L S S K - - - Q D H M H M D C E T R - - - - - - - - - - - - - - - - - - - N F S S F S K K Y C E K Y G Q Y P
Os014652_Os03t0    - - - - G G A A A A - - - G A A K G D E S P A R I S N G E K T A T R P P A T N G S G M A M A S L L D K Y R R E C - - - -
 
AT1G17950.1     - - - - S H I N H F Q V L K E F L T G K I G F R N S T T P I Q E G A I D Q T K R P M E F Y N F L Q V N T D S K I H - - -
gm045477_Glyma1    C V T L T H S S F Q F P G K K F Y F Q D P S S A G S T V P - - - - - - P G K S Q S V E F Y D F L Q V N T D S N E S - - -
pt023852_POPTR_    M V - - T H S Y L P A F C K E F Y N E D P S H C E D - - - - - - - - - - - Q S R P I E F Y D F L Q V N T D S N K S - - -
Os014652_Os03t0    - - - - G A A G L F A I G R H - H N S K E D Y C S S T N - - - - - - - E D T S K S V E F Y D F L Q V N A S S S D T K C G
 
AT1G17950.1     - - - - E L I D N S R K D E E E D V D Q N N R I P N E N C - - - V P F F D F L S V G N S A S Q G L C
gm045477_Glyma1    - - - - E V T D N A R R D D E E - V S Q D A V G Q K N K D N G - V P F I D F L S T G G C - - - - - -
pt023852_POPTR_    - - - - E V I D N A R R D D E E - V D Q Q E A L E N N Q S K A D V P F I D F F S V N G K S S S - - -
Os014652_Os03t0    S S I E E Q E D N - - R D D D Q A E G Q - - - - - - - - - - - - V Q L I D F M E V G T T S R Q - - -
 
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