fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G17950.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt026619 not found in 214aa AT1G17950.1 not_1st 0.495238095 II
Pt036337 not found in 247aa AT1G17950.1 not_1st 0.472380952 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G17950.1     MMCSRGHWRPAEDEKLRELVEQFGPHNWNAIAQKLSGRSGKSCRLRWFNQLDPRINRNPF
pt026619_POPTR_ -MCTRGHWRPAEDEKLKELVEKYGPHNWNAIAEKLHGRSGKSCRLRWFNQLDPRINRSPF
pt036337_POPTR_ -MSSRGHWRLAEDEKLLELVEQYGPHNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRSPF
                 *.:***** ****** ****::******:**:** *********************.**

AT1G17950.1     TEEEEERLLASHRIHGNRWSVIARFFPGRTDNAVKNHWHVIMARRGRERSKLRPRGLGHD
pt026619_POPTR_ TEEEEERLLASHRIHGNRWAVIARLFPGRTDNAVKNHWHVIMARRYRERSRL------HA
pt036337_POPTR_ TEEEEERLLACHRIHGNKWAVIAKQFPGRTDNAVKNHWHVIMARRCRERSKI------HA
                **********.******:*:***: ******************** ****::      * 

AT1G17950.1     GTVAATGMIGNYK-----------DCDKERRLATTTAINFPYQF--SHINHFQVLKEFLT
pt026619_POPTR_ KRTAQA-LVNEQKFS-SKQDMQI-NCE---------------------------------
pt036337_POPTR_ KRASPSLLVNEQKPSFSNQDVRIMNCEPR-----NNAPSFVHKYFESYCDHYH-------
                  .: : ::.: *           :*:                                 

AT1G17950.1     GKIGFRNSTTPIQE------GAIDQTKRPMEFYNFLQVNTDSKIHELIDNSRKDEEEDVD
pt026619_POPTR_ ----TRSFSSFLLLLMFLTYMAIADQNRPIEFYDFLQVNTESNKSEVIDNARREDEE-VD
pt036337_POPTR_ -HPFTRNYTSICKDLYSQNPSHCEGKNQPLEFYDFLQVKTESSKSEVIDNARRDDVE-VD
                     *. ::                ::*:***:****:*:*.  *:***:*::: * **

AT1G17950.1     QNNRI---PNENCVPFFDFLSVGNSASQGLC
pt026619_POPTR_ QREVILEHQSKAGVPFIDFFSA---------
pt036337_POPTR_ QEAKELP-KSRAGFPFIDFLSAGNQVS-GL-
                *.       ..  .**:**:*.
BoxShade v3.31 C (beta, 970507) Output
AT1G17950.1     M M C S R G H W R P A E D E K L R E L V E Q F G P H N W N A I A Q K L S G R S G K S C R L R W F N Q L D P R I N R N P F
pt026619_POPTR_    - M C T R G H W R P A E D E K L K E L V E K Y G P H N W N A I A E K L H G R S G K S C R L R W F N Q L D P R I N R S P F
pt036337_POPTR_    - M S S R G H W R L A E D E K L L E L V E Q Y G P H N W N S I A E K L Q G R S G K S C R L R W F N Q L D P R I N R S P F
 
AT1G17950.1     T E E E E E R L L A S H R I H G N R W S V I A R F F P G R T D N A V K N H W H V I M A R R G R E R S K L R P R G L G H D
pt026619_POPTR_    T E E E E E R L L A S H R I H G N R W A V I A R L F P G R T D N A V K N H W H V I M A R R Y R E R S R L - - - - - - H A
pt036337_POPTR_    T E E E E E R L L A C H R I H G N K W A V I A K Q F P G R T D N A V K N H W H V I M A R R C R E R S K I - - - - - - H A
 
AT1G17950.1     G T V A A T G M I G N Y K - - - - - - - - - - - D C D K E R R L A T T T A I N F P Y Q F - - S H I N H F Q V L K E F L T
pt026619_POPTR_    K R T A Q A - L V N E Q K F S - S K Q D M Q I - N C E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt036337_POPTR_    K R A S P S L L V N E Q K P S F S N Q D V R I M N C E P R - - - - - N N A P S F V H K Y F E S Y C D H Y H - - - - - - -
 
AT1G17950.1     G K I G F R N S T T P I Q E - - - - - - G A I D Q T K R P M E F Y N F L Q V N T D S K I H E L I D N S R K D E E E D V D
pt026619_POPTR_    - - - - T R S F S S F L L L L M F L T Y M A I A D Q N R P I E F Y D F L Q V N T E S N K S E V I D N A R R E D E E - V D
pt036337_POPTR_    - H P F T R N Y T S I C K D L Y S Q N P S H C E G K N Q P L E F Y D F L Q V K T E S S K S E V I D N A R R D D V E - V D
 
AT1G17950.1     Q N N R I - - - P N E N C V P F F D F L S V G N S A S Q G L C
pt026619_POPTR_    Q R E V I L E H Q S K A G V P F I D F F S A - - - - - - - - -
pt036337_POPTR_    Q E A K E L P - K S R A G F P F I D F L S A G N Q V S - G L -
 
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