fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G17950.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt026618 not found in 236aa AT1G73410.1 not_not 0.483809523 III
Pt003784 not found in 241aa AT1G73410.1 not_not 0.464761904 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G17950.1     MMCSRGHWRPAEDEKLRELVEQFGPHNWNAIAQKLSGRSGKSCRLRWFNQLDPRINRNPF
pt003784_POPTR_ -MSTRGHWRPAEDEKLRKLVDQYGPHNWNSIAEKLQGKSGKSCRLRWFNQLDPRINRSPF
pt026618_POPTR_ -MCTRGHWRPAEDEKLKELVEKYGPHNWNAIAEKLHGRSGKSCRLRWFNQLDPRINRSPF
                 *.:************::**:::******:**:** *:*******************.**

AT1G17950.1     TEEEEERLLASHRIHGNRWSVIARFFPGRTDNAVKNHWHVIMARRGRERSKLRPRGLGHD
pt003784_POPTR_ TEEEEERLLACQQIHGNKWAVIAKQFPGRTDNAVKNHWHIIMARKCRERSRI------HA
pt026618_POPTR_ TEEEEERLLASHRIHGNRWAVIARLFPGRTDNAVKNHWHVIMARRYRERSRL------HA
                **********.::****:*:***: **************:****: ****::      * 

AT1G17950.1     GTVAATGMIGNYK-------------DCDKERRLATTTAINFPYQF--------SHINHF
pt003784_POPTR_ KRAASQALLVNEQTHSFSNQDVMRIVNCEP-RNLAPSFFHKFCE----------SYCDCY
pt026618_POPTR_ KRTA-QA-LVNEQKFS-SKQDMQ--INCET-RSFS-SFVKKYCEKFGQYPLITHSYLPAF
                  .*  . : * :             :*:  * :: :   ::            *:   :

AT1G17950.1     QVLKEF-LTGKIGFRNSTTPIQEGAIDQTKRPMEFYNFLQVNTDSKIHELIDNSRKDEEE
pt003784_POPTR_ H--RPFCLNYPTSFCNENTSHHEG------KPLEFYDFLQVKTDSSKSEALDNARRDDVE
pt026618_POPTR_ W--KEF-YNDDLSNCKD-----QN------RPIEFYDFLQVNTESNKSEVIDNARREDEE
                   : *  .   .  :.     :.      :*:***:****:*:*.  * :**:*::: *

AT1G17950.1     DVDQNNR-----IPNENCVPFFDFLSVGNSASQGLC
pt003784_POPTR_ -VDQEAREL---HQRKANFPFIDFLSAGNSN-----
pt026618_POPTR_ -VDQ--REVILEHQSKAGVPFIDFFSA---------
                 ***  *        :  .**:**:*.
BoxShade v3.31 C (beta, 970507) Output
AT1G17950.1     M M C S R G H W R P A E D E K L R E L V E Q F G P H N W N A I A Q K L S G R S G K S C R L R W F N Q L D P R I N R N P F
pt003784_POPTR_    - M S T R G H W R P A E D E K L R K L V D Q Y G P H N W N S I A E K L Q G K S G K S C R L R W F N Q L D P R I N R S P F
pt026618_POPTR_    - M C T R G H W R P A E D E K L K E L V E K Y G P H N W N A I A E K L H G R S G K S C R L R W F N Q L D P R I N R S P F
 
AT1G17950.1     T E E E E E R L L A S H R I H G N R W S V I A R F F P G R T D N A V K N H W H V I M A R R G R E R S K L R P R G L G H D
pt003784_POPTR_    T E E E E E R L L A C Q Q I H G N K W A V I A K Q F P G R T D N A V K N H W H I I M A R K C R E R S R I - - - - - - H A
pt026618_POPTR_    T E E E E E R L L A S H R I H G N R W A V I A R L F P G R T D N A V K N H W H V I M A R R Y R E R S R L - - - - - - H A
 
AT1G17950.1     G T V A A T G M I G N Y K - - - - - - - - - - - - - D C D K E R R L A T T T A I N F P Y Q F - - - - - - - - S H I N H F
pt003784_POPTR_    K R A A S Q A L L V N E Q T H S F S N Q D V M R I V N C E P - R N L A P S F F H K F C E - - - - - - - - - - S Y C D C Y
pt026618_POPTR_    K R T A - Q A - L V N E Q K F S - S K Q D M Q - - I N C E T - R S F S - S F V K K Y C E K F G Q Y P L I T H S Y L P A F
 
AT1G17950.1     Q V L K E F - L T G K I G F R N S T T P I Q E G A I D Q T K R P M E F Y N F L Q V N T D S K I H E L I D N S R K D E E E
pt003784_POPTR_    H - - R P F C L N Y P T S F C N E N T S H H E G - - - - - - K P L E F Y D F L Q V K T D S S K S E A L D N A R R D D V E
pt026618_POPTR_    W - - K E F - Y N D D L S N C K D - - - - - Q N - - - - - - R P I E F Y D F L Q V N T E S N K S E V I D N A R R E D E E
 
AT1G17950.1     D V D Q N N R - - - - - I P N E N C V P F F D F L S V G N S A S Q G L C
pt003784_POPTR_    - V D Q E A R E L - - - H Q R K A N F P F I D F L S A G N S N - - - - -
pt026618_POPTR_    - V D Q - - R E V I L E H Q S K A G V P F I D F F S A - - - - - - - - -
 
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