fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G17950.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt023852 not found in 243aa AT1G17950.1 1st_1st 0.508571428 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G17950.1     MMCSRGHWRPAEDEKLRELVEQFGPHNWNAIAQKLSGRSGKSCRLRWFNQLDPRINRNPF
pt023852_POPTR_ -MCTRGHWRPAEDEKLKELVEKYGPHNWNAIAEKLQGRSGKSCRLRWFNQLDPRINRSPF
                 **:************:****::*********:**.*********************.**

AT1G17950.1     TEEEEERLLASHRIHGNRWSVIARFFPGRTDNAVKNHWHVIMARRGRERSKLRPRGLGHD
pt023852_POPTR_ TEEEEERLLASHRIHGNRWAIIARFFPGRTDNAVKNHWHVIMARRYRERSRLHAKR----
                *******************::************************ ****:*:.:     

AT1G17950.1     GTVAATGMIGNYK----------DCDKERRLATTTAINFPY-QFSHINHFQV---LKEFL
pt023852_POPTR_ ---AAQTLVNDNKLSSKQDHMHMDCETRNFSSFSKKYCEKYGQYPMVTHSYLPAFCKEF-
                   **  ::.: *          **:...  : :.     * *:. :.*  :    *** 

AT1G17950.1     TGKIGFRNSTTPIQEGAIDQTKRPMEFYNFLQVNTDSKIHELIDNSRKDEEEDVDQNNRI
pt023852_POPTR_ -----YNEDPSHCE----DQS-RPIEFYDFLQVNTDSNKSEVIDNARRDDEE-VDQQEAL
                     :.:..:  :    **: **:***:********:  *:***:*:*:** ***:: :

AT1G17950.1     PNENC---VPFFDFLSV-GNSASQGLC
pt023852_POPTR_ ENNQSKADVPFIDFFSVNGKSSS----
                 *::.   ***:**:** *:*:*
BoxShade v3.31 C (beta, 970507) Output
AT1G17950.1     M M C S R G H W R P A E D E K L R E L V E Q F G P H N W N A I A Q K L S G R S G K S C R L R W F N Q L D P R I N R N P F
pt023852_POPTR_    - M C T R G H W R P A E D E K L K E L V E K Y G P H N W N A I A E K L Q G R S G K S C R L R W F N Q L D P R I N R S P F
 
AT1G17950.1     T E E E E E R L L A S H R I H G N R W S V I A R F F P G R T D N A V K N H W H V I M A R R G R E R S K L R P R G L G H D
pt023852_POPTR_    T E E E E E R L L A S H R I H G N R W A I I A R F F P G R T D N A V K N H W H V I M A R R Y R E R S R L H A K R - - - -
 
AT1G17950.1     G T V A A T G M I G N Y K - - - - - - - - - - D C D K E R R L A T T T A I N F P Y - Q F S H I N H F Q V - - - L K E F L
pt023852_POPTR_    - - - A A Q T L V N D N K L S S K Q D H M H M D C E T R N F S S F S K K Y C E K Y G Q Y P M V T H S Y L P A F C K E F -
 
AT1G17950.1     T G K I G F R N S T T P I Q E G A I D Q T K R P M E F Y N F L Q V N T D S K I H E L I D N S R K D E E E D V D Q N N R I
pt023852_POPTR_    - - - - - Y N E D P S H C E - - - - D Q S - R P I E F Y D F L Q V N T D S N K S E V I D N A R R D D E E - V D Q Q E A L
 
AT1G17950.1     P N E N C - - - V P F F D F L S V - G N S A S Q G L C
pt023852_POPTR_    E N N Q S K A D V P F I D F F S V N G K S S S - - - -
 
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