fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G17950.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt023852 not found in 243aa AT1G17950.1 1st_1st 0.508571428 Ia
Pt026619 not found in 214aa AT1G17950.1 not_1st 0.495238095 II
Pt026618 not found in 236aa AT1G73410.1 not_not 0.483809523 III
Pt036337 not found in 247aa AT1G17950.1 not_1st 0.472380952 II
Pt003784 not found in 241aa AT1G73410.1 not_not 0.464761904 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G17950.1     MMCSRGHWRPAEDEKLRELVEQFGPHNWNAIAQKLSGRSGKSCRLRWFNQLDPRINRNPF
pt023852_POPTR_ -MCTRGHWRPAEDEKLKELVEKYGPHNWNAIAEKLQGRSGKSCRLRWFNQLDPRINRSPF
pt036337_POPTR_ -MSSRGHWRLAEDEKLLELVEQYGPHNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRSPF
pt003784_POPTR_ -MSTRGHWRPAEDEKLRKLVDQYGPHNWNSIAEKLQGKSGKSCRLRWFNQLDPRINRSPF
pt026619_POPTR_ -MCTRGHWRPAEDEKLKELVEKYGPHNWNAIAEKLHGRSGKSCRLRWFNQLDPRINRSPF
pt026618_POPTR_ -MCTRGHWRPAEDEKLKELVEKYGPHNWNAIAEKLHGRSGKSCRLRWFNQLDPRINRSPF
                 *.:***** ****** :**:::******:**:** *:*******************.**

AT1G17950.1     TEEEEERLLASHRIHGNRWSVIARFFPGRTDNAVKNHWHVIMARRGRERSKLRPRG----
pt023852_POPTR_ TEEEEERLLASHRIHGNRWAIIARFFPGRTDNAVKNHWHVIMARRYRERSRLHAKR-AAQ
pt036337_POPTR_ TEEEEERLLACHRIHGNKWAVIAKQFPGRTDNAVKNHWHVIMARRCRERSKIHAKR-ASP
pt003784_POPTR_ TEEEEERLLACQQIHGNKWAVIAKQFPGRTDNAVKNHWHIIMARKCRERSRIHAKRAASQ
pt026619_POPTR_ TEEEEERLLASHRIHGNRWAVIARLFPGRTDNAVKNHWHVIMARRYRERSRLHAKR-TAQ
pt026618_POPTR_ TEEEEERLLASHRIHGNRWAVIARLFPGRTDNAVKNHWHVIMARRYRERSRLHAKR-TAQ
                **********.::****:*::**: **************:****: ****:::.:     

AT1G17950.1     --LGHDGTVA-ATGMIGNYKDCDKERRLATTTAINFPYQFSHINHFQVLKEFLTGKI-GF
pt023852_POPTR_ T-LVNDNKLS-SKQDH-MHMDCET-RNFS-SFSKKYCEKY--GQYPMVTHSYLPAFCKEF
pt036337_POPTR_ SLLVNEQKPSFSNQDV-RIMNCEP-RNNAPSFVHKYFESYCDHYHHPFTRNY-TSICKDL
pt003784_POPTR_ ALLVNEQTHSFSNQDVMRIVNCEP-RNLAPSFFHKFCESYCDCYHRPFCLNYPTSFC---
pt026619_POPTR_ A-LVNEQKFS-SKQD--MQINCET-RSFS-SFL-----------LLLMFLTYMA------
pt026618_POPTR_ A-LVNEQKFS-SKQD--MQINCET-RSFS-SFVKKYCEKF--GQYPLITHSYLPAFWKEF
                  * :: . : :.       :*:  *  : :                .   : .      

AT1G17950.1     RNSTTPIQEGAIDQTKRPMEFYNFLQVNTDSKIHELIDNSRKDEEEDVDQNNRIPNENC-
pt023852_POPTR_ YNEDPSHCEDQ----SRPIEFYDFLQVNTDSNKSEVIDNARRDDEE-VDQQEALENNQSK
pt036337_POPTR_ YSQNPSHCEGK----NQPLEFYDFLQVKTESSKSEVIDNARRDDVE-VDQ-EAKELPKSR
pt003784_POPTR_ -NENTSHHEGK------PLEFYDFLQVKTDSSKSEALDNARRDDVE-VDQ-EARELHQRK
pt026619_POPTR_ -------IADQ----NRPIEFYDFLQVNTESNKSEVIDNARREDEE-VDQREVILEHQSK
pt026618_POPTR_ YNDDLSNCKDQ----NRPIEFYDFLQVNTESNKSEVIDNARREDEE-VDQREVILEHQSK
                         .       *:***:****:*:*.  * :**:*::: * *** :     :  

AT1G17950.1     --VPFFDFLSV-GNSASQGLC
pt023852_POPTR_ ADVPFIDFFSVNGKSSS----
pt036337_POPTR_ AGFPFIDFLSA-GNQVS-GL-
pt003784_POPTR_ ANFPFIDFLSA-GNSN-----
pt026619_POPTR_ AGVPFIDFFSA----------
pt026618_POPTR_ AGVPFIDFFSA----------
                  .**:**:*.
BoxShade v3.31 C (beta, 970507) Output
AT1G17950.1     M M C S R G H W R P A E D E K L R E L V E Q F G P H N W N A I A Q K L S G R S G K S C R L R W F N Q L D P R I N R N P F
pt023852_POPTR_    - M C T R G H W R P A E D E K L K E L V E K Y G P H N W N A I A E K L Q G R S G K S C R L R W F N Q L D P R I N R S P F
pt036337_POPTR_    - M S S R G H W R L A E D E K L L E L V E Q Y G P H N W N S I A E K L Q G R S G K S C R L R W F N Q L D P R I N R S P F
pt003784_POPTR_    - M S T R G H W R P A E D E K L R K L V D Q Y G P H N W N S I A E K L Q G K S G K S C R L R W F N Q L D P R I N R S P F
pt026619_POPTR_    - M C T R G H W R P A E D E K L K E L V E K Y G P H N W N A I A E K L H G R S G K S C R L R W F N Q L D P R I N R S P F
pt026618_POPTR_    - M C T R G H W R P A E D E K L K E L V E K Y G P H N W N A I A E K L H G R S G K S C R L R W F N Q L D P R I N R S P F
 
AT1G17950.1     T E E E E E R L L A S H R I H G N R W S V I A R F F P G R T D N A V K N H W H V I M A R R G R E R S K L R P R G - - - -
pt023852_POPTR_    T E E E E E R L L A S H R I H G N R W A I I A R F F P G R T D N A V K N H W H V I M A R R Y R E R S R L H A K R - A A Q
pt036337_POPTR_    T E E E E E R L L A C H R I H G N K W A V I A K Q F P G R T D N A V K N H W H V I M A R R C R E R S K I H A K R - A S P
pt003784_POPTR_    T E E E E E R L L A C Q Q I H G N K W A V I A K Q F P G R T D N A V K N H W H I I M A R K C R E R S R I H A K R A A S Q
pt026619_POPTR_    T E E E E E R L L A S H R I H G N R W A V I A R L F P G R T D N A V K N H W H V I M A R R Y R E R S R L H A K R - T A Q
pt026618_POPTR_    T E E E E E R L L A S H R I H G N R W A V I A R L F P G R T D N A V K N H W H V I M A R R Y R E R S R L H A K R - T A Q
 
AT1G17950.1     - - L G H D G T V A - A T G M I G N Y K D C D K E R R L A T T T A I N F P Y Q F S H I N H F Q V L K E F L T G K I - G F
pt023852_POPTR_    T - L V N D N K L S - S K Q D H - M H M D C E T - R N F S - S F S K K Y C E K Y - - G Q Y P M V T H S Y L P A F C K E F
pt036337_POPTR_    S L L V N E Q K P S F S N Q D V - R I M N C E P - R N N A P S F V H K Y F E S Y C D H Y H H P F T R N Y - T S I C K D L
pt003784_POPTR_    A L L V N E Q T H S F S N Q D V M R I V N C E P - R N L A P S F F H K F C E S Y C D C Y H R P F C L N Y P T S F C - - -
pt026619_POPTR_    A - L V N E Q K F S - S K Q D - - M Q I N C E T - R S F S - S F L - - - - - - - - - - - L L L M F L T Y M A - - - - - -
pt026618_POPTR_    A - L V N E Q K F S - S K Q D - - M Q I N C E T - R S F S - S F V K K Y C E K F - - G Q Y P L I T H S Y L P A F W K E F
 
AT1G17950.1     R N S T T P I Q E G A I D Q T K R P M E F Y N F L Q V N T D S K I H E L I D N S R K D E E E D V D Q N N R I P N E N C -
pt023852_POPTR_    Y N E D P S H C E D Q - - - - S R P I E F Y D F L Q V N T D S N K S E V I D N A R R D D E E - V D Q Q E A L E N N Q S K
pt036337_POPTR_    Y S Q N P S H C E G K - - - - N Q P L E F Y D F L Q V K T E S S K S E V I D N A R R D D V E - V D Q - E A K E L P K S R
pt003784_POPTR_    - N E N T S H H E G K - - - - - - P L E F Y D F L Q V K T D S S K S E A L D N A R R D D V E - V D Q - E A R E L H Q R K
pt026619_POPTR_    - - - - - - - I A D Q - - - - N R P I E F Y D F L Q V N T E S N K S E V I D N A R R E D E E - V D Q R E V I L E H Q S K
pt026618_POPTR_    Y N D D L S N C K D Q - - - - N R P I E F Y D F L Q V N T E S N K S E V I D N A R R E D E E - V D Q R E V I L E H Q S K
 
AT1G17950.1     - - V P F F D F L S V - G N S A S Q G L C
pt023852_POPTR_    A D V P F I D F F S V N G K S S S - - - -
pt036337_POPTR_    A G F P F I D F L S A - G N Q V S - G L -
pt003784_POPTR_    A N F P F I D F L S A - G N S N - - - - -
pt026619_POPTR_    A G V P F I D F F S A - - - - - - - - - -
pt026618_POPTR_    A G V P F I D F F S A - - - - - - - - - -
 
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