fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G17950.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os014652 not found in 245aa AT1G17950.1 1st_1st 0.44 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G17950.1     MMCSRGHWRPAEDEKLRELVEQFGPHNWNAIAQKLSGRSGKSCRLRWFNQLDPRINRNPF
Os014652_Os03t0 -MCTRGHWRPSEDEKLKELVARYGPHNWNAIAEKLQGRSGKSCRLRWFNQLDPRINRSPF
                 **:******:*****:*** ::*********:**.*********************.**

AT1G17950.1     TEEEEERLLASHRIHGNRWSVIARFFPGRTDNAVKNHWHVIMARRGRERSKLRPRGLGHD
Os014652_Os03t0 TEEEEELLLASHRAHGNRWAVIARLFPGRTDNAVKNHWHVIMARRCRERMRLSNRRGGAA
                ****** ****** *****:****:******************** *** :*  *  *  

AT1G17950.1     GTVAATGMIGNYKDCDKERRLATTTAINFPYQFSHINHFQVLKEFL--TGKIGF------
Os014652_Os03t0 AAGAAKGDESPARISNGEKTATRPPATN----GSGMAMASLLDKYRRECGAAGLFAIGRH
                .: **.*  .  : .: *:  : ..* *     * :   .:*.::    *  *:      

AT1G17950.1     RNSTTPIQEGAIDQTKRPMEFYNFLQVN---TDSKIHELIDNSRKDEEEDVDQNNRIPNE
Os014652_Os03t0 HNSKEDYCSSTNEDTSKSVEFYDFLQVNASSSDTKCGSSIE--EQEDNRDDDQ-----AE
                :**.    ..: ::*.:.:***:*****   :*:*  . *:  .::::.* **      *

AT1G17950.1     NCVPFFDFLSVGNSASQGLC
Os014652_Os03t0 GQVQLIDFMEVGTTSRQ---
                . * ::**:.**.:: *
BoxShade v3.31 C (beta, 970507) Output
AT1G17950.1     M M C S R G H W R P A E D E K L R E L V E Q F G P H N W N A I A Q K L S G R S G K S C R L R W F N Q L D P R I N R N P F
Os014652_Os03t0    - M C T R G H W R P S E D E K L K E L V A R Y G P H N W N A I A E K L Q G R S G K S C R L R W F N Q L D P R I N R S P F
 
AT1G17950.1     T E E E E E R L L A S H R I H G N R W S V I A R F F P G R T D N A V K N H W H V I M A R R G R E R S K L R P R G L G H D
Os014652_Os03t0    T E E E E E L L L A S H R A H G N R W A V I A R L F P G R T D N A V K N H W H V I M A R R C R E R M R L S N R R G G A A
 
AT1G17950.1     G T V A A T G M I G N Y K D C D K E R R L A T T T A I N F P Y Q F S H I N H F Q V L K E F L - - T G K I G F - - - - - -
Os014652_Os03t0    A A G A A K G D E S P A R I S N G E K T A T R P P A T N - - - - G S G M A M A S L L D K Y R R E C G A A G L F A I G R H
 
AT1G17950.1     R N S T T P I Q E G A I D Q T K R P M E F Y N F L Q V N - - - T D S K I H E L I D N S R K D E E E D V D Q N N R I P N E
Os014652_Os03t0    H N S K E D Y C S S T N E D T S K S V E F Y D F L Q V N A S S S D T K C G S S I E - - E Q E D N R D D D Q - - - - - A E
 
AT1G17950.1     N C V P F F D F L S V G N S A S Q G L C
Os014652_Os03t0    G Q V Q L I D F M E V G T T S R Q - - -
 
0