Input
| Putative repression domain
|
|
AT1G17950.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Sb020348 |
not found in 317aa |
AT1G73410.1 |
1st_not |
0.447619047 |
II |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT1G17950.1 MMCSRGHWRPAEDEKLRELVEQFGPHNWNAIAQKLSGRSGKSCRLRWFNQLDPRINRNPF
Sb020348_Sorbi1 -MCTRGHWRPSEDEKLKELVALYGPHNWNAIAEKLQGRSGKSCRLRWFNQLDPRINRSPF
**:******:*****:*** :*********:**.*********************.**
AT1G17950.1 TEEEEERLLASHRIHGNRWSVIARFFPGRTDNAVKNHWHVIMARRGRERSKL-RPRGLGH
Sb020348_Sorbi1 SEEEEELLLASHRVHGNRWAVIARLFPGRTDNAVKNHWHVIMARRCRERMRLSNRRGGGA
:***** ******:*****:****:******************** *** :* . ** *
AT1G17950.1 DG-TVAATGMI---GNYKDCDKERRLATTTAI---NFPYQFS----HINHFQVLKEFLTG
Sb020348_Sorbi1 AGAAVAGAGAVEDDNNPRNAKKPRPDASSMASLLDKYRREFSVVPFAINHNSNQQDYC--
* :**.:* : .* ::..* * *:: * :: :** *** . :::
AT1G17950.1 KIGFRNSTTPIQEGAIDQTKRPMEFYNFLQVNTDSKIHELIDNSRKDEEEDVDQNNRIPN
Sb020348_Sorbi1 ------STTNEAD-----TNKSVEFYDFLQVNANSSDTKCGSSIEEQEENRDDQ-----A
*** : *::.:***:*****::*. : .. .::**: **
AT1G17950.1 ENCVPFFDFLSVGNSASQGLC
Sb020348_Sorbi1 EGQVQFIDFLEVGASHRQ---
*. * *:***.** * *
BoxShade v3.31 C (beta, 970507) Output
AT1G17950.1 |
M |
M |
C |
S |
R |
G |
H |
W |
R |
P |
A |
E |
D |
E |
K |
L |
R |
E |
L |
V |
E |
Q |
F |
G |
P |
H |
N |
W |
N |
A |
I |
A |
Q |
K |
L |
S |
G |
R |
S |
G |
K |
S |
C |
R |
L |
R |
W |
F |
N |
Q |
L |
D |
P |
R |
I |
N |
R |
N |
P |
F |
Sb020348_Sorbi1 |
- |
M |
C |
T |
R |
G |
H |
W |
R |
P |
S |
E |
D |
E |
K |
L |
K |
E |
L |
V |
A |
L |
Y |
G |
P |
H |
N |
W |
N |
A |
I |
A |
E |
K |
L |
Q |
G |
R |
S |
G |
K |
S |
C |
R |
L |
R |
W |
F |
N |
Q |
L |
D |
P |
R |
I |
N |
R |
S |
P |
F |
|
AT1G17950.1 |
T |
E |
E |
E |
E |
E |
R |
L |
L |
A |
S |
H |
R |
I |
H |
G |
N |
R |
W |
S |
V |
I |
A |
R |
F |
F |
P |
G |
R |
T |
D |
N |
A |
V |
K |
N |
H |
W |
H |
V |
I |
M |
A |
R |
R |
G |
R |
E |
R |
S |
K |
L |
- |
R |
P |
R |
G |
L |
G |
H |
Sb020348_Sorbi1 |
S |
E |
E |
E |
E |
E |
L |
L |
L |
A |
S |
H |
R |
V |
H |
G |
N |
R |
W |
A |
V |
I |
A |
R |
L |
F |
P |
G |
R |
T |
D |
N |
A |
V |
K |
N |
H |
W |
H |
V |
I |
M |
A |
R |
R |
C |
R |
E |
R |
M |
R |
L |
S |
N |
R |
R |
G |
G |
G |
A |
|
AT1G17950.1 |
D |
G |
- |
T |
V |
A |
A |
T |
G |
M |
I |
- |
- |
- |
G |
N |
Y |
K |
D |
C |
D |
K |
E |
R |
R |
L |
A |
T |
T |
T |
A |
I |
- |
- |
- |
N |
F |
P |
Y |
Q |
F |
S |
- |
- |
- |
- |
H |
I |
N |
H |
F |
Q |
V |
L |
K |
E |
F |
L |
T |
G |
Sb020348_Sorbi1 |
A |
G |
A |
A |
V |
A |
G |
A |
G |
A |
V |
E |
D |
D |
N |
N |
P |
R |
N |
A |
K |
K |
P |
R |
P |
D |
A |
S |
S |
M |
A |
S |
L |
L |
D |
K |
Y |
R |
R |
E |
F |
S |
V |
V |
P |
F |
A |
I |
N |
H |
N |
S |
N |
Q |
Q |
D |
Y |
C |
- |
- |
|
AT1G17950.1 |
K |
I |
G |
F |
R |
N |
S |
T |
T |
P |
I |
Q |
E |
G |
A |
I |
D |
Q |
T |
K |
R |
P |
M |
E |
F |
Y |
N |
F |
L |
Q |
V |
N |
T |
D |
S |
K |
I |
H |
E |
L |
I |
D |
N |
S |
R |
K |
D |
E |
E |
E |
D |
V |
D |
Q |
N |
N |
R |
I |
P |
N |
Sb020348_Sorbi1 |
- |
- |
- |
- |
- |
- |
S |
T |
T |
N |
E |
A |
D |
- |
- |
- |
- |
- |
T |
N |
K |
S |
V |
E |
F |
Y |
D |
F |
L |
Q |
V |
N |
A |
N |
S |
S |
D |
T |
K |
C |
G |
S |
S |
I |
E |
E |
Q |
E |
E |
N |
R |
D |
D |
Q |
- |
- |
- |
- |
- |
A |
|
AT1G17950.1 |
E |
N |
C |
V |
P |
F |
F |
D |
F |
L |
S |
V |
G |
N |
S |
A |
S |
Q |
G |
L |
C |
Sb020348_Sorbi1 |
E |
G |
Q |
V |
Q |
F |
I |
D |
F |
L |
E |
V |
G |
A |
S |
H |
R |
Q |
- |
- |
- |
|
|