fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G17950.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb020348 not found in 317aa AT1G73410.1 1st_not 0.447619047 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G17950.1     MMCSRGHWRPAEDEKLRELVEQFGPHNWNAIAQKLSGRSGKSCRLRWFNQLDPRINRNPF
Sb020348_Sorbi1 -MCTRGHWRPSEDEKLKELVALYGPHNWNAIAEKLQGRSGKSCRLRWFNQLDPRINRSPF
                 **:******:*****:***  :*********:**.*********************.**

AT1G17950.1     TEEEEERLLASHRIHGNRWSVIARFFPGRTDNAVKNHWHVIMARRGRERSKL-RPRGLGH
Sb020348_Sorbi1 SEEEEELLLASHRVHGNRWAVIARLFPGRTDNAVKNHWHVIMARRCRERMRLSNRRGGGA
                :***** ******:*****:****:******************** *** :* . ** * 

AT1G17950.1     DG-TVAATGMI---GNYKDCDKERRLATTTAI---NFPYQFS----HINHFQVLKEFLTG
Sb020348_Sorbi1 AGAAVAGAGAVEDDNNPRNAKKPRPDASSMASLLDKYRREFSVVPFAINHNSNQQDYC--
                 * :**.:* :   .* ::..* *  *:: *    ::  :**     *** .  :::   

AT1G17950.1     KIGFRNSTTPIQEGAIDQTKRPMEFYNFLQVNTDSKIHELIDNSRKDEEEDVDQNNRIPN
Sb020348_Sorbi1 ------STTNEAD-----TNKSVEFYDFLQVNANSSDTKCGSSIEEQEENRDDQ-----A
                      ***   :     *::.:***:*****::*.  :  .. .::**:  **      

AT1G17950.1     ENCVPFFDFLSVGNSASQGLC
Sb020348_Sorbi1 EGQVQFIDFLEVGASHRQ---
                *. * *:***.** *  *
BoxShade v3.31 C (beta, 970507) Output
AT1G17950.1     M M C S R G H W R P A E D E K L R E L V E Q F G P H N W N A I A Q K L S G R S G K S C R L R W F N Q L D P R I N R N P F
Sb020348_Sorbi1    - M C T R G H W R P S E D E K L K E L V A L Y G P H N W N A I A E K L Q G R S G K S C R L R W F N Q L D P R I N R S P F
 
AT1G17950.1     T E E E E E R L L A S H R I H G N R W S V I A R F F P G R T D N A V K N H W H V I M A R R G R E R S K L - R P R G L G H
Sb020348_Sorbi1    S E E E E E L L L A S H R V H G N R W A V I A R L F P G R T D N A V K N H W H V I M A R R C R E R M R L S N R R G G G A
 
AT1G17950.1     D G - T V A A T G M I - - - G N Y K D C D K E R R L A T T T A I - - - N F P Y Q F S - - - - H I N H F Q V L K E F L T G
Sb020348_Sorbi1    A G A A V A G A G A V E D D N N P R N A K K P R P D A S S M A S L L D K Y R R E F S V V P F A I N H N S N Q Q D Y C - -
 
AT1G17950.1     K I G F R N S T T P I Q E G A I D Q T K R P M E F Y N F L Q V N T D S K I H E L I D N S R K D E E E D V D Q N N R I P N
Sb020348_Sorbi1    - - - - - - S T T N E A D - - - - - T N K S V E F Y D F L Q V N A N S S D T K C G S S I E E Q E E N R D D Q - - - - - A
 
AT1G17950.1     E N C V P F F D F L S V G N S A S Q G L C
Sb020348_Sorbi1    E G Q V Q F I D F L E V G A S H R Q - - -
 
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