fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G17950.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm025122 not found in 237aa AT1G17950.1 not_1st 0.48 II
Gm014930 not found in 258aa AT1G17950.1 not_1st 0.407619047 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G17950.1     ----------MMCSRGHWRPAEDEKLRELVEQFGPHNWNAIAQKLSGRSGKSCRLRWFNQ
gm014930_Glyma0 MEDSSAGEDTKTCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQ
gm025122_Glyma0 -----------MCSRGHWRPAEDEKLRELVERYGPHNWNAIAEKLRGRSGKSCRLRWFNQ
                            *.*************:***::*.:***:**:** **************

AT1G17950.1     LDPRINRNPFTEEEEERLLASHRIHGNRWSVIARFFPGRTDNAVKNHWHVIMARRGRERS
gm014930_Glyma0 LDPRINRRPFTEEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQREQS
gm025122_Glyma0 LDPRINRSPFTEEEEERLLASHRIHGNRWAVIARHFPGRTDNAVKNHWHVMMARIRRERS
                ******* ************:******:*::*** ***************:***  **:*

AT1G17950.1     K-------LRPRGLGHDGTVAATGMIG--NYKDCD---------------------KERR
gm014930_Glyma0 K-----------------------LCGKRSFQDCQILPLVILWRLGILVLCQPPPPKERE
gm025122_Glyma0 KNYSPKQPLFPPNL------------------QVD---------------------LETN
                *                               : :                      * .

AT1G17950.1     LATTTAINFPY--QFSH----INH--FQVLKEFLTGKIGFRN-----STTPI--------
gm014930_Glyma0 TISITLLVLLV--IYPNPAFSLPN--YKRVV----------------PTSPLISTFLGSS
gm025122_Glyma0 FETIPSFVDKYYEKYSHPCVPLTHSSFQ----FPTKNFYFQDPSSAGSTVP---------
                  : . :       :.:    : :  ::                   .* *         

AT1G17950.1     -QEGAIDQTKRPMEFYNFLQVNTDSKIHELIDNSRKDEEE----DVDQNNRIPNENCVPF
gm014930_Glyma0 DHDG--RIKKDLMSFCDN-NTNSSSTFTKLKASTEKDQQQT---NEDETNNIK-PKEVPF
gm025122_Glyma0 ------RDNCESVEFYDFLQVNTDSNKSEVTDNARRDEEEVSQDAVGMKNK---DNGVPF
                        .   :.* :  :.*:.*.  ::  .:.:*:::      . .*.    : ***

AT1G17950.1     FDFLSVGNSASQGLC
gm014930_Glyma0 IDFLGVGV-------
gm025122_Glyma0 IDFLSTGG------C
                :***..*
BoxShade v3.31 C (beta, 970507) Output
AT1G17950.1     - - - - - - - - - - M M C S R G H W R P A E D E K L R E L V E Q F G P H N W N A I A Q K L S G R S G K S C R L R W F N Q
gm014930_Glyma0    M E D S S A G E D T K T C P R G H W R P A E D E K L R Q L V E Q Y G A Q N W N S I A E K L Q G R S G K S C R L R W F N Q
gm025122_Glyma0    - - - - - - - - - - - M C S R G H W R P A E D E K L R E L V E R Y G P H N W N A I A E K L R G R S G K S C R L R W F N Q
 
AT1G17950.1     L D P R I N R N P F T E E E E E R L L A S H R I H G N R W S V I A R F F P G R T D N A V K N H W H V I M A R R G R E R S
gm014930_Glyma0    L D P R I N R R P F T E E E E E R L L A A H R I H G N K W A L I A R L F P G R T D N A V K N H W H V I M A R K Q R E Q S
gm025122_Glyma0    L D P R I N R S P F T E E E E E R L L A S H R I H G N R W A V I A R H F P G R T D N A V K N H W H V M M A R I R R E R S
 
AT1G17950.1     K - - - - - - - L R P R G L G H D G T V A A T G M I G - - N Y K D C D - - - - - - - - - - - - - - - - - - - - - K E R R
gm014930_Glyma0    K - - - - - - - - - - - - - - - - - - - - - - - L C G K R S F Q D C Q I L P L V I L W R L G I L V L C Q P P P P K E R E
gm025122_Glyma0    K N Y S P K Q P L F P P N L - - - - - - - - - - - - - - - - - - Q V D - - - - - - - - - - - - - - - - - - - - - L E T N
 
AT1G17950.1     L A T T T A I N F P Y - - Q F S H - - - - I N H - - F Q V L K E F L T G K I G F R N - - - - - S T T P I - - - - - - - -
gm014930_Glyma0    T I S I T L L V L L V - - I Y P N P A F S L P N - - Y K R V V - - - - - - - - - - - - - - - - P T S P L I S T F L G S S
gm025122_Glyma0    F E T I P S F V D K Y Y E K Y S H P C V P L T H S S F Q - - - - F P T K N F Y F Q D P S S A G S T V P - - - - - - - - -
 
AT1G17950.1     - Q E G A I D Q T K R P M E F Y N F L Q V N T D S K I H E L I D N S R K D E E E - - - - D V D Q N N R I P N E N C V P F
gm014930_Glyma0    D H D G - - R I K K D L M S F C D N - N T N S S S T F T K L K A S T E K D Q Q Q T - - - N E D E T N N I K - P K E V P F
gm025122_Glyma0    - - - - - - R D N C E S V E F Y D F L Q V N T D S N K S E V T D N A R R D E E E V S Q D A V G M K N K - - - D N G V P F
 
AT1G17950.1     F D F L S V G N S A S Q G L C
gm014930_Glyma0    I D F L G V G V - - - - - - -
gm025122_Glyma0    I D F L S T G G - - - - - - C
 
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