fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G17950.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm045477 not found in 234aa AT1G17950.1 1st_1st 0.487619047 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G17950.1     MMCSRGHWRPAEDEKLRELVEQFGPHNWNAIAQKLSGRSGKSCRLRWFNQLDPRINRNPF
gm045477_Glyma1 -MCSRGHWRPAEDEKLRELVEHYGPHNWNAIAEKLRGRSGKSCRLRWFNQLDPRINRNPF
                 ********************::*********:** ************************

AT1G17950.1     TEEEEERLLASHRIHGNRWSVIARFFPGRTDNAVKNHWHVIMARRGRERS-----KLRPR
gm045477_Glyma1 TEEEEERLLASHRIHGNRWAVIARHFPGRTDNAVKNHWHVMMARIRRERSKINNPKLQPL
                *******************:****.***************:***  ****     **:* 

AT1G17950.1     GLGHDGTVAATGMIGNYKDCDKERRLATTTAINFPYQ-FSH----INH--FQVLKEFLTG
gm045477_Glyma1 ------------FAPNLKD-DLE---AIPSFVEKYYEKYSHPCVTLTHSSFQ----FPGK
                            :  * ** * *   * .: ::  *: :**    :.*  **    *   

AT1G17950.1     KIGFRN-----STTPIQEGAIDQTKRPMEFYNFLQVNTDSKIHELIDNSRKDEEE----D
gm045477_Glyma1 KFYFQDPSSAGSTVPPGK------SQSVEFYDFLQVNTDSNESEVTDNARRDDEEVSQDA
                *: *::     **.*  :      .:.:***:********:  *: **:*:*:**     

AT1G17950.1     VDQNNRIPNENCVPFFDFLSVGNSASQGLC
gm045477_Glyma1 VGQKNK---DNGVPFIDFLSTGG------C
                *.*:*:   :* ***:****.*.      *
BoxShade v3.31 C (beta, 970507) Output
AT1G17950.1     M M C S R G H W R P A E D E K L R E L V E Q F G P H N W N A I A Q K L S G R S G K S C R L R W F N Q L D P R I N R N P F
gm045477_Glyma1    - M C S R G H W R P A E D E K L R E L V E H Y G P H N W N A I A E K L R G R S G K S C R L R W F N Q L D P R I N R N P F
 
AT1G17950.1     T E E E E E R L L A S H R I H G N R W S V I A R F F P G R T D N A V K N H W H V I M A R R G R E R S - - - - - K L R P R
gm045477_Glyma1    T E E E E E R L L A S H R I H G N R W A V I A R H F P G R T D N A V K N H W H V M M A R I R R E R S K I N N P K L Q P L
 
AT1G17950.1     G L G H D G T V A A T G M I G N Y K D C D K E R R L A T T T A I N F P Y Q - F S H - - - - I N H - - F Q V L K E F L T G
gm045477_Glyma1    - - - - - - - - - - - - F A P N L K D - D L E - - - A I P S F V E K Y Y E K Y S H P C V T L T H S S F Q - - - - F P G K
 
AT1G17950.1     K I G F R N - - - - - S T T P I Q E G A I D Q T K R P M E F Y N F L Q V N T D S K I H E L I D N S R K D E E E - - - - D
gm045477_Glyma1    K F Y F Q D P S S A G S T V P P G K - - - - - - S Q S V E F Y D F L Q V N T D S N E S E V T D N A R R D D E E V S Q D A
 
AT1G17950.1     V D Q N N R I P N E N C V P F F D F L S V G N S A S Q G L C
gm045477_Glyma1    V G Q K N K - - - D N G V P F I D F L S T G G - - - - - - C
 
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