fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G17950.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm045477 not found in 234aa AT1G17950.1 1st_1st 0.487619047 Ia
Gm025122 not found in 237aa AT1G17950.1 not_1st 0.48 II
Gm014930 not found in 258aa AT1G17950.1 not_1st 0.407619047 II
Gm010780 not found in 297aa AT1G73410.1 not_not 0.4 III
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G17950.1     ----------MMCSRGHWRPAEDEKLRELVEQFGPHNWNAIAQKLSGRSGKSCRLRWFNQ
gm010780_Glyma0 MEDSSAGEDTRTCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQ
gm045477_Glyma1 -----------MCSRGHWRPAEDEKLRELVEHYGPHNWNAIAEKLRGRSGKSCRLRWFNQ
gm014930_Glyma0 MEDSSAGEDTKTCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQ
gm025122_Glyma0 -----------MCSRGHWRPAEDEKLRELVERYGPHNWNAIAEKLRGRSGKSCRLRWFNQ
                            *.*************:***::*.:***:**:** **************

AT1G17950.1     LDPRINRNPFTEEEEERLLASHRIHGNRWSVIARFFPGRTDNAVKNHWHVIMARRGRERS
gm010780_Glyma0 LDPRINRRPFTEEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQREQS
gm045477_Glyma1 LDPRINRNPFTEEEEERLLASHRIHGNRWAVIARHFPGRTDNAVKNHWHVMMARIRRERS
gm014930_Glyma0 LDPRINRRPFTEEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQREQS
gm025122_Glyma0 LDPRINRSPFTEEEEERLLASHRIHGNRWAVIARHFPGRTDNAVKNHWHVMMARIRRERS
                ******* ************:******:*::*** ***************:***  **:*

AT1G17950.1     K--------LRPR-------GLGHDGT---VAATGMIGNYKDCDKE-RRLATTTAINF--
gm010780_Glyma0 KLYM-----LFSTTRFGLENGRFFDFRS--------LDNNKDDDNNYRIVSDTTSSTSLA
gm045477_Glyma1 KINNPKLQPLFAP-------NLKDDL----EAIPSFVEKYYE------------------
gm014930_Glyma0 KLC-----------------GK-------------------------RSFQDCQILPLVI
gm025122_Glyma0 KNYSPK-QPLFPP-------NLQVDLETNFETIPSFVDKYYE------------------
                *                   .                                       

AT1G17950.1     -------------PYQFSH-----INH--FQVLKEFLTGKIGFRN-----STTPI-----
gm010780_Glyma0 SWNFASVPTTTSTTTKGARDYFNTSRSSSVYLSEIYPNPAFSLPNYKRVVPTSPF-RTFL
gm045477_Glyma1 ---------------KYSHPCV-TLTHSSFQ----FPGKKFYFQDPSSAGSTVP------
gm014930_Glyma0 LWRLGILVLCQPPPPK-ERE---TISITLLVLLVIYPNPAFSLPNYKRVVPTSPLISTFL
gm025122_Glyma0 ---------------KYSHPCV-PLTHSSFQ----FPTKNFYFQDPSSAGSTVP------
                               :  :          .     :    : : :     .* *      

AT1G17950.1     -----QEGAIDQTKRPMEFYNFLQVNTDSKIHELIDNSRKD--EEE----DVDQNNRIPN
gm010780_Glyma0 GSSDHHDGW-IIKRDLMSFCDNNNNNSSSTFSKLKASTEKDHQQQQTNEDAT---NVEPK
gm045477_Glyma1 ----------PGKSQSVEFYDFLQVNTDSNESEVTDNARRD--DEEVSQDAVGQKNK---
gm014930_Glyma0 GSSD-HDGR--IKKDLMSFCD-NNTNSSSTFTKLKASTEKD--QQQTNEDET--NNIKPK
gm025122_Glyma0 ----------RDNCESVEFYDFLQVNTDSNKSEVTDNARRD--EEEVSQDAVGMKNK---
                            .   :.* :  : *:.*.  ::  .:.:*  :::     .   *    

AT1G17950.1     ENCVPFFDFLSVGNSASQGLC
gm010780_Glyma0 E--VPFIDFLGVGVSSS----
gm045477_Glyma1 DNGVPFIDFLSTGG------C
gm014930_Glyma0 E--VPFIDFLGVGV-------
gm025122_Glyma0 DNGVPFIDFLSTGG------C
                :  ***:***..*
BoxShade v3.31 C (beta, 970507) Output
AT1G17950.1     - - - - - - - - - - M M C S R G H W R P A E D E K L R E L V E Q F G P H N W N A I A Q K L S G R S G K S C R L R W F N Q
gm010780_Glyma0    M E D S S A G E D T R T C P R G H W R P A E D E K L R Q L V E Q Y G A Q N W N S I A E K L Q G R S G K S C R L R W F N Q
gm045477_Glyma1    - - - - - - - - - - - M C S R G H W R P A E D E K L R E L V E H Y G P H N W N A I A E K L R G R S G K S C R L R W F N Q
gm014930_Glyma0    M E D S S A G E D T K T C P R G H W R P A E D E K L R Q L V E Q Y G A Q N W N S I A E K L Q G R S G K S C R L R W F N Q
gm025122_Glyma0    - - - - - - - - - - - M C S R G H W R P A E D E K L R E L V E R Y G P H N W N A I A E K L R G R S G K S C R L R W F N Q
 
AT1G17950.1     L D P R I N R N P F T E E E E E R L L A S H R I H G N R W S V I A R F F P G R T D N A V K N H W H V I M A R R G R E R S
gm010780_Glyma0    L D P R I N R R P F T E E E E E R L L A A H R I H G N K W A L I A R L F P G R T D N A V K N H W H V I M A R K Q R E Q S
gm045477_Glyma1    L D P R I N R N P F T E E E E E R L L A S H R I H G N R W A V I A R H F P G R T D N A V K N H W H V M M A R I R R E R S
gm014930_Glyma0    L D P R I N R R P F T E E E E E R L L A A H R I H G N K W A L I A R L F P G R T D N A V K N H W H V I M A R K Q R E Q S
gm025122_Glyma0    L D P R I N R S P F T E E E E E R L L A S H R I H G N R W A V I A R H F P G R T D N A V K N H W H V M M A R I R R E R S
 
AT1G17950.1     K - - - - - - - - L R P R - - - - - - - G L G H D G T - - - V A A T G M I G N Y K D C D K E - R R L A T T T A I N F - -
gm010780_Glyma0    K L Y M - - - - - L F S T T R F G L E N G R F F D F R S - - - - - - - - L D N N K D D D N N Y R I V S D T T S S T S L A
gm045477_Glyma1    K I N N P K L Q P L F A P - - - - - - - N L K D D L - - - - E A I P S F V E K Y Y E - - - - - - - - - - - - - - - - - -
gm014930_Glyma0    K L C - - - - - - - - - - - - - - - - - G K - - - - - - - - - - - - - - - - - - - - - - - - - R S F Q D C Q I L P L V I
gm025122_Glyma0    K N Y S P K - Q P L F P P - - - - - - - N L Q V D L E T N F E T I P S F V D K Y Y E - - - - - - - - - - - - - - - - - -
 
AT1G17950.1     - - - - - - - - - - - - - P Y Q F S H - - - - - I N H - - F Q V L K E F L T G K I G F R N - - - - - S T T P I - - - - -
gm010780_Glyma0    S W N F A S V P T T T S T T T K G A R D Y F N T S R S S S V Y L S E I Y P N P A F S L P N Y K R V V P T S P F - R T F L
gm045477_Glyma1    - - - - - - - - - - - - - - - K Y S H P C V - T L T H S S F Q - - - - F P G K K F Y F Q D P S S A G S T V P - - - - - -
gm014930_Glyma0    L W R L G I L V L C Q P P P P K - E R E - - - T I S I T L L V L L V I Y P N P A F S L P N Y K R V V P T S P L I S T F L
gm025122_Glyma0    - - - - - - - - - - - - - - - K Y S H P C V - P L T H S S F Q - - - - F P T K N F Y F Q D P S S A G S T V P - - - - - -
 
AT1G17950.1     - - - - - Q E G A I D Q T K R P M E F Y N F L Q V N T D S K I H E L I D N S R K D - - E E E - - - - D V D Q N N R I P N
gm010780_Glyma0    G S S D H H D G W - I I K R D L M S F C D N N N N N S S S T F S K L K A S T E K D H Q Q Q Q T N E D A T - - - N V E P K
gm045477_Glyma1    - - - - - - - - - - P G K S Q S V E F Y D F L Q V N T D S N E S E V T D N A R R D - - D E E V S Q D A V G Q K N K - - -
gm014930_Glyma0    G S S D - H D G R - - I K K D L M S F C D - N N T N S S S T F T K L K A S T E K D - - Q Q Q T N E D E T - - N N I K P K
gm025122_Glyma0    - - - - - - - - - - R D N C E S V E F Y D F L Q V N T D S N K S E V T D N A R R D - - E E E V S Q D A V G M K N K - - -
 
AT1G17950.1     E N C V P F F D F L S V G N S A S Q G L C
gm010780_Glyma0    E - - V P F I D F L G V G V S S S - - - -
gm045477_Glyma1    D N G V P F I D F L S T G G - - - - - - C
gm014930_Glyma0    E - - V P F I D F L G V G V - - - - - - -
gm025122_Glyma0    D N G V P F I D F L S T G G - - - - - - C
 
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