fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G18400.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm017947 not found in 165aa AT1G73830.1 not_not 0.465295629 III
Gm020184 not found in 175aa AT1G73830.1 not_not 0.442159383 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G18400.1     MANFENLSSDFQTIAMDIYSSITQAADLNNNNSNLHFQTFHPSSTSLESLFLHHHQQQLL
gm017947_Glyma0 -------------------------MDLPETSSANSTPAVSESGSKIKHS----------
gm020184_Glyma0 -------------------------MEIQNFMMPFSFPVLVPIGS-VKNEIHEVLQIQLL
                                          :: :        ..   .: ::            

AT1G18400.1     HFPGNSPDSSNNFSSTSSFLHSDHNIVDETKKRKALLPTLSSSETSGVSDNTNVIATETG
gm017947_Glyma0 ---------------------------------------------SG-------------
gm020184_Glyma0 LF----------------------------------LRVEARQKISG-------------
                                                             **             

AT1G18400.1     SLRRGKRLKKKKEEEDEKEREVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPG
gm017947_Glyma0 ---RGKRVKSNV-TEEEKAKEVVHVRARRGQATDSHSLAERVRRGKINEKLRCLQNIVPG
gm020184_Glyma0 ---RGKRVKRNS-IEDKKPNEVVHVRAKRGQATDSHSLAERVRRGKINEKLRCLQNIVPG
                   ****:* :   *::* .*******:*********************:*****::***

AT1G18400.1     CYKAMGMATMLDEIINYVQSLQNQVEFLSMKLTAASSFYDFNSETDAVDSMQRAKARETV
gm017947_Glyma0 CYKTMGMAVMLDEIINYVQSLQHQVEFLSLKLTAASTFYDFNSETDALETMQRARASEAK
gm020184_Glyma0 CYKTMGMAIMLDEIINYVQSLQHQVEFLSMKLTAASTYYDLNSESDALETMQRARASEVK
                ***:**** *************:******:******::**:***:**:::****:* *. 

AT1G18400.1     EMGRQTRDGS---PVFHLSTWSL
gm017947_Glyma0 ELGKYKKEGYGGVSFFQPA-WPL
gm020184_Glyma0 ELGKCDQ------FVFTP-----
                *:*:  :       .*
BoxShade v3.31 C (beta, 970507) Output
AT1G18400.1     M A N F E N L S S D F Q T I A M D I Y S S I T Q A A D L N N N N S N L H F Q T F H P S S T S L E S L F L H H H Q Q Q L L
gm017947_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - M D L P E T S S A N S T P A V S E S G S K I K H S - - - - - - - - - -
gm020184_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - M E I Q N F M M P F S F P V L V P I G S - V K N E I H E V L Q I Q L L
 
AT1G18400.1     H F P G N S P D S S N N F S S T S S F L H S D H N I V D E T K K R K A L L P T L S S S E T S G V S D N T N V I A T E T G
gm017947_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S G - - - - - - - - - - - - -
gm020184_Glyma0    L F - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - L R V E A R Q K I S G - - - - - - - - - - - - -
 
AT1G18400.1     S L R R G K R L K K K K E E E D E K E R E V V H V R A R R G Q A T D S H S L A E R V R R G K I N E R L R C L Q D M V P G
gm017947_Glyma0    - - - R G K R V K S N V - T E E E K A K E V V H V R A R R G Q A T D S H S L A E R V R R G K I N E K L R C L Q N I V P G
gm020184_Glyma0    - - - R G K R V K R N S - I E D K K P N E V V H V R A K R G Q A T D S H S L A E R V R R G K I N E K L R C L Q N I V P G
 
AT1G18400.1     C Y K A M G M A T M L D E I I N Y V Q S L Q N Q V E F L S M K L T A A S S F Y D F N S E T D A V D S M Q R A K A R E T V
gm017947_Glyma0    C Y K T M G M A V M L D E I I N Y V Q S L Q H Q V E F L S L K L T A A S T F Y D F N S E T D A L E T M Q R A R A S E A K
gm020184_Glyma0    C Y K T M G M A I M L D E I I N Y V Q S L Q H Q V E F L S M K L T A A S T Y Y D L N S E S D A L E T M Q R A R A S E V K
 
AT1G18400.1     E M G R Q T R D G S - - - P V F H L S T W S L
gm017947_Glyma0    E L G K Y K K E G Y G G V S F F Q P A - W P L
gm020184_Glyma0    E L G K C D Q - - - - - - F V F T P - - - - -
 
0