fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G18400.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm025252 not found in 301aa AT1G73830.1 1st_not 0.465295629 II
Gm013216 not found in 246aa AT1G18400.1 not_1st 0.442159383 II
Gm047818 not found in 268aa AT1G18400.1 not_1st 0.434447300 II
Gm039597 not found in 259aa AT1G18400.1 not_1st 0.424164524 II
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G18400.1     MANF-ENLSS----------DFQTI--AMDI---YSSITQAADLNNNNSNLHFQTFHPSS
gm039597_Glyma1 MAEFTENLQR----IGPSSFPFLDIDPSMELLNQFIGMNQLYVLDNSNLMPYF-------
gm025252_Glyma0 MAEFTENMQLQSNIIRPSQFPFLEIDPSMELLNQFIGMNQ-HVLENSNL-----------
gm047818_Glyma1 MAEFTENLQN----ISSSS-PFLDIDPSMELLNQFIGMNQLYVLDNSNLMPYF-------
gm013216_Glyma0 MAEFTADLQS-------LRFPFLDID-NMEM---------------QNLMMPF-------
                **:*  ::.            *  *   *::               .*            

AT1G18400.1     TSLESLFLHHHQQQLLHFPGN----SP------DSSNNFSSTSSFLHSDHNIVDETKKRK
gm039597_Glyma1 -SFDTFLLGPQEPE---FPGNLEEDFPFLFNHVNHNNALPISLPIFQA-ENEIHEGKKRK
gm025252_Glyma0 -----------KPE---FPGNLEENFPAL---VNH-NALPVSLPIFQA-ENEIHEGKKRK
gm047818_Glyma1 -SCDTF-LGPQEPE---FPGNLEEDFPFLFHHVNH-NAPPVSLPIFQA-ENEIHEGNKRK
gm013216_Glyma0 -SCESF-LGSPEAE---FAGNLEENFP------DH-NEVPVLVPIINSVKNEIHEGQKRK
                           : :   *.**     *      :  *  .   .:::: .* :.* :***

AT1G18400.1     A--LLPTLSSSETSGVSDNTNVIAT----------------------------------E
gm039597_Glyma1 SMDLPET-----TCFVLDI-----Y-----------------------------------
gm025252_Glyma0 SVDLPETSSANSTPAVSESGSKIKHVNFFYYFSLFFSTHHVLCWIYIFMFKVVLCKSKTE
gm047818_Glyma1 SMDLLETSFANSTSAVSETGSKIKH-----------------------------------
gm013216_Glyma0 ATDIWEPSSANSTPAVFESGSKTKN-----------------------------------
                :  :  .     *  * :                                          

AT1G18400.1     TG---------SLRRGKRLKKKKEEEDEKEREVVHVRARRGQATDSHSLAERVRRGKINE
gm039597_Glyma1 -----------SSGRGKRVKNNVT-EEEKAKEVVNVRARSGQATDSRNLAERVRRGKINE
gm025252_Glyma0 FGLLFFCEYFQSSGRGKRVKSNVT-EEEKAKEVVHVRARRGQATDSHSLAERVRRGKINE
gm047818_Glyma1 -----------SSGRGKRLKNNVTEEEEKAKEVVNARARRGQATDSHNLAERVRRGKINE
gm013216_Glyma0 -----------SCGRGKRVKRNMI-EDKKPNEVVHVRAKRGQATDSHSLAERVRRGKINE
                           *  ****:* :   *::* .***:.**: ******:.************

AT1G18400.1     RLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQVEFLSMKLTAASSFYDFNSETDAVD
gm039597_Glyma1 KLRYLQNIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSLKLTAPSTFYDFNSEIDALE
gm025252_Glyma0 KLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQVEFLSLKLTAASTFYDFNSETDALE
gm047818_Glyma1 KLRYLQNIVPGCYKTMSMAVMLDEIINYVQSLQHQVEFLSLELTAASTFYDFNSEIDAFE
gm013216_Glyma0 KLRCLQNIVPGCYKTMGMAIMLDEIINYVQSLQHQVEFLSMKLNAASTYYDFNSESDVLE
                :** **::******:*.** *************:******::*.*.*::****** *..:

AT1G18400.1     SMQRAKARETVEMGRQTRDGSPVFHLS----TW--SL
gm039597_Glyma1 TMQRARASEAKELGMYKREGYGGFWICFTQQL-----
gm025252_Glyma0 TMQRARASEAKELGKYKKEGYGG--VSFFQPAW--PL
gm047818_Glyma1 TMQRSRAYEAKELGKYKREGHGG--VSLLQPTW--HL
gm013216_Glyma0 TMQRARASEVKELDRYVREECEG--VSCFEPTWSWPL
                :***::* *. *:.   ::      :.
BoxShade v3.31 C (beta, 970507) Output
AT1G18400.1     M A N F - E N L S S - - - - - - - - - - D F Q T I - - A M D I - - - Y S S I T Q A A D L N N N N S N L H F Q T F H P S S
gm039597_Glyma1    M A E F T E N L Q R - - - - I G P S S F P F L D I D P S M E L L N Q F I G M N Q L Y V L D N S N L M P Y F - - - - - - -
gm025252_Glyma0    M A E F T E N M Q L Q S N I I R P S Q F P F L E I D P S M E L L N Q F I G M N Q - H V L E N S N L - - - - - - - - - - -
gm047818_Glyma1    M A E F T E N L Q N - - - - I S S S S - P F L D I D P S M E L L N Q F I G M N Q L Y V L D N S N L M P Y F - - - - - - -
gm013216_Glyma0    M A E F T A D L Q S - - - - - - - L R F P F L D I D - N M E M - - - - - - - - - - - - - - - Q N L M M P F - - - - - - -
 
AT1G18400.1     T S L E S L F L H H H Q Q Q L L H F P G N - - - - S P - - - - - - D S S N N F S S T S S F L H S D H N I V D E T K K R K
gm039597_Glyma1    - S F D T F L L G P Q E P E - - - F P G N L E E D F P F L F N H V N H N N A L P I S L P I F Q A - E N E I H E G K K R K
gm025252_Glyma0    - - - - - - - - - - - K P E - - - F P G N L E E N F P A L - - - V N H - N A L P V S L P I F Q A - E N E I H E G K K R K
gm047818_Glyma1    - S C D T F - L G P Q E P E - - - F P G N L E E D F P F L F H H V N H - N A P P V S L P I F Q A - E N E I H E G N K R K
gm013216_Glyma0    - S C E S F - L G S P E A E - - - F A G N L E E N F P - - - - - - D H - N E V P V L V P I I N S V K N E I H E G Q K R K
 
AT1G18400.1     A - - L L P T L S S S E T S G V S D N T N V I A T - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - E
gm039597_Glyma1    S M D L P E T - - - - - T C F V L D I - - - - - Y - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm025252_Glyma0    S V D L P E T S S A N S T P A V S E S G S K I K H V N F F Y Y F S L F F S T H H V L C W I Y I F M F K V V L C K S K T E
gm047818_Glyma1    S M D L L E T S F A N S T S A V S E T G S K I K H - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm013216_Glyma0    A T D I W E P S S A N S T P A V F E S G S K T K N - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT1G18400.1     T G - - - - - - - - - S L R R G K R L K K K K E E E D E K E R E V V H V R A R R G Q A T D S H S L A E R V R R G K I N E
gm039597_Glyma1    - - - - - - - - - - - S S G R G K R V K N N V T - E E E K A K E V V N V R A R S G Q A T D S R N L A E R V R R G K I N E
gm025252_Glyma0    F G L L F F C E Y F Q S S G R G K R V K S N V T - E E E K A K E V V H V R A R R G Q A T D S H S L A E R V R R G K I N E
gm047818_Glyma1    - - - - - - - - - - - S S G R G K R L K N N V T E E E E K A K E V V N A R A R R G Q A T D S H N L A E R V R R G K I N E
gm013216_Glyma0    - - - - - - - - - - - S C G R G K R V K R N M I - E D K K P N E V V H V R A K R G Q A T D S H S L A E R V R R G K I N E
 
AT1G18400.1     R L R C L Q D M V P G C Y K A M G M A T M L D E I I N Y V Q S L Q N Q V E F L S M K L T A A S S F Y D F N S E T D A V D
gm039597_Glyma1    K L R Y L Q N I V P G C Y K T M G M A V M L D E I I N Y V Q S L Q N Q V E F L S L K L T A P S T F Y D F N S E I D A L E
gm025252_Glyma0    K L R C L Q N I V P G C Y K T M G M A V M L D E I I N Y V Q S L Q H Q V E F L S L K L T A A S T F Y D F N S E T D A L E
gm047818_Glyma1    K L R Y L Q N I V P G C Y K T M S M A V M L D E I I N Y V Q S L Q H Q V E F L S L E L T A A S T F Y D F N S E I D A F E
gm013216_Glyma0    K L R C L Q N I V P G C Y K T M G M A I M L D E I I N Y V Q S L Q H Q V E F L S M K L N A A S T Y Y D F N S E S D V L E
 
AT1G18400.1     S M Q R A K A R E T V E M G R Q T R D G S P V F H L S - - - - T W - - S L
gm039597_Glyma1    T M Q R A R A S E A K E L G M Y K R E G Y G G F W I C F T Q Q L - - - - -
gm025252_Glyma0    T M Q R A R A S E A K E L G K Y K K E G Y G G - - V S F F Q P A W - - P L
gm047818_Glyma1    T M Q R S R A Y E A K E L G K Y K R E G H G G - - V S L L Q P T W - - H L
gm013216_Glyma0    T M Q R A R A S E V K E L D R Y V R E E C E G - - V S C F E P T W S W P L
 
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