fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G18835.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb016496 not found in 92aa AT3G28917.1 1st_not 0.538461538 II
Gm010025 not found in 89aa AT1G18835.1 not_1st 0.792899408 II
Pt003370 not found in 156aa AT3G28917.1 1st_not 0.710059171 II
Pp005070 not found in 350aa AT4G24660.1 1st_not 0.562130177 II
Sm001402 FILFLSLSLSLCFPAK in 171/1004 AT2G36060.1 1st_not 0.502958579 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G18835.1     ------------------------------------------------------------
gm010025_Glyma0 ------------------------------------------------------------
Sm001402_Selmo1 ---------------------------DIPIPI--------SAQFSAA------------
Sb016496_Sorbi1 ------------------------------------------------------------
pt003370_POPTR_ -------------------------MEGLYISVTT------KSNFLLL------------
pp005070_Pp1s49 MDLGSGHESSNDQPQPEQPQMQTSPLPSLPAPIPMMLPSLGASNYHATPTSLHQQQQHHH
                                                                            

AT1G18835.1     ------------------------------------------------------------
gm010025_Glyma0 ------------------------------------------------------------
Sm001402_Selmo1 -----AIHE---TAAKLKLLASGNGTPAAQVGS---------------------------
Sb016496_Sorbi1 ------------------------------------------------------------
pt003370_POPTR_ ------------SLLPLSIF-----TPYSNYRSV----FQLENSSLAYQGFEGEGSGEEL
pp005070_Pp1s49 HHHPHALHHDLPSATKLKLL-NQNNTPSGNGGSVPTKYNDVKNS-------------DQV
                                                                            

AT1G18835.1     ----MKK--RQVVIKQ-RKSSYTMTSSS------SNVRYVECQKNHAANIGGYAVDGCRE
gm010025_Glyma0 ----MKK--RQVVVK-----SVANTSSSV----MRNIRYGECQKNHAANIGGYAVDGCRE
Sm001402_Selmo1 ---------GAAVVVVSGEAGAAAAAAGGDSKSKRPVRYTQCLKNHAAGIGGHALDGCGE
Sb016496_Sorbi1 ----MGP--QQ------DRRSMANGTAARSKEAAKVVHYRECQRNHAASIGGHAVDGCRE
pt003370_POPTR_ GTSQMRK--RQVVVRRSEEPSRSSTTSSFT---IRNVKYGECQKNHAAGVGGYAVDGCRE
pp005070_Pp1s49 ATDQAREILRQAVVTAVTESNAASTKAANAAK-KGAVRYRECQKNHAAGMGGHAMDGCGE
                                    . :   :.        ::* :* :****.:**:*:*** *

AT1G18835.1     FMASGGD---DALTCAACGCHRNFHRREVDTEVVC-EY----------------------
gm010025_Glyma0 FMASTGEGAGGALTCAACGCHRNFHRREVNTEVVC-EY----------------------
Sm001402_Selmo1 FMPCGEEGTLDALKCAACDCHRNFHRREVEGEPSCLECHHRKDKKRLMLP----------
Sb016496_Sorbi1 FMASGAEGTAAALMCAACGCHRSFHRREVETADDR-DC----------------------
pt003370_POPTR_ FMASGEEGTAAALTCAACGCHRNFHRREVETEVAC-DC----------------------
pp005070_Pp1s49 FMPGGGEGSVDALRCAACNCHRNFHRREVEGEVLC-DC---KRKPKMGAPLGTGIVNTGQ
                **.   :    ** ****.***.******:      :                       

AT1G18835.1     ----------------------------SPPNANN-------------------------
gm010025_Glyma0 ----------------------------SPPNSGR-------------------------
Sm001402_Selmo1 -----------------SRSGELDDQGVYMPNAGGPN-----------------------
Sb016496_Sorbi1 ----------------------------SSTTSSG-------------------------
pt003370_POPTR_ ----------------------------SSPSSNGN------------------------
pp005070_Pp1s49 PPTLTSTTPVTTLALTASVAGQMTPLAMAALSAGGPTDSDEQDDGPGNVTSGGGMMMSMR
                                               .:.                          

AT1G18835.1     ------------------------------------------------------------
gm010025_Glyma0 ------------------------------------------------------------
Sm001402_Selmo1 ----LKKRFRTKFTGDQKERMLAFADKVGWKIQKHDEAEVQQFCNEVGVKRHVLKVWMHN
Sb016496_Sorbi1 ------------------------------------------------------------
pt003370_POPTR_ ------------------------------------------------------------
pp005070_Pp1s49 SPSAIKKRFRTKFTTEQKDKMCAFAEKLGWRIQKHDEAAVQEFCTTVGVKRHVLKVWMHN
                                                                            

AT1G18835.1     ---------
gm010025_Glyma0 ---------
Sm001402_Selmo1 NKHTLGKKM
Sb016496_Sorbi1 ---------
pt003370_POPTR_ ---------
pp005070_Pp1s49 NKHTVGKKP
BoxShade v3.31 C (beta, 970507) Output
AT1G18835.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm010025_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sm001402_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - D I P I P I - - - - - - - - S A Q F S A A - - - - - - - - - - - -
Sb016496_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt003370_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - M E G L Y I S V T T - - - - - - K S N F L L L - - - - - - - - - - - -
pp005070_Pp1s49    M D L G S G H E S S N D Q P Q P E Q P Q M Q T S P L P S L P A P I P M M L P S L G A S N Y H A T P T S L H Q Q Q Q H H H
 
AT1G18835.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm010025_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sm001402_Selmo1    - - - - - A I H E - - - T A A K L K L L A S G N G T P A A Q V G S - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb016496_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt003370_POPTR_    - - - - - - - - - - - - S L L P L S I F - - - - - T P Y S N Y R S V - - - - F Q L E N S S L A Y Q G F E G E G S G E E L
pp005070_Pp1s49    H H H P H A L H H D L P S A T K L K L L - N Q N N T P S G N G G S V P T K Y N D V K N S - - - - - - - - - - - - - D Q V
 
AT1G18835.1     - - - - M K K - - R Q V V I K Q - R K S S Y T M T S S S - - - - - - S N V R Y V E C Q K N H A A N I G G Y A V D G C R E
gm010025_Glyma0    - - - - M K K - - R Q V V V K - - - - - S V A N T S S S V - - - - M R N I R Y G E C Q K N H A A N I G G Y A V D G C R E
Sm001402_Selmo1    - - - - - - - - - G A A V V V V S G E A G A A A A A A G G D S K S K R P V R Y T Q C L K N H A A G I G G H A L D G C G E
Sb016496_Sorbi1    - - - - M G P - - Q Q - - - - - - D R R S M A N G T A A R S K E A A K V V H Y R E C Q R N H A A S I G G H A V D G C R E
pt003370_POPTR_    G T S Q M R K - - R Q V V V R R S E E P S R S S T T S S F T - - - I R N V K Y G E C Q K N H A A G V G G Y A V D G C R E
pp005070_Pp1s49    A T D Q A R E I L R Q A V V T A V T E S N A A S T K A A N A A K - K G A V R Y R E C Q K N H A A G M G G H A M D G C G E
 
AT1G18835.1     F M A S G G D - - - D A L T C A A C G C H R N F H R R E V D T E V V C - E Y - - - - - - - - - - - - - - - - - - - - - -
gm010025_Glyma0    F M A S T G E G A G G A L T C A A C G C H R N F H R R E V N T E V V C - E Y - - - - - - - - - - - - - - - - - - - - - -
Sm001402_Selmo1    F M P C G E E G T L D A L K C A A C D C H R N F H R R E V E G E P S C L E C H H R K D K K R L M L P - - - - - - - - - -
Sb016496_Sorbi1    F M A S G A E G T A A A L M C A A C G C H R S F H R R E V E T A D D R - D C - - - - - - - - - - - - - - - - - - - - - -
pt003370_POPTR_    F M A S G E E G T A A A L T C A A C G C H R N F H R R E V E T E V A C - D C - - - - - - - - - - - - - - - - - - - - - -
pp005070_Pp1s49    F M P G G G E G S V D A L R C A A C N C H R N F H R R E V E G E V L C - D C - - - K R K P K M G A P L G T G I V N T G Q
 
AT1G18835.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - S P P N A N N - - - - - - - - - - - - - - - - - - - - - - - - -
gm010025_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - S P P N S G R - - - - - - - - - - - - - - - - - - - - - - - - -
Sm001402_Selmo1    - - - - - - - - - - - - - - - - - S R S G E L D D Q G V Y M P N A G G P N - - - - - - - - - - - - - - - - - - - - - - -
Sb016496_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - S S T T S S G - - - - - - - - - - - - - - - - - - - - - - - - -
pt003370_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - S S P S S N G N - - - - - - - - - - - - - - - - - - - - - - - -
pp005070_Pp1s49    P P T L T S T T P V T T L A L T A S V A G Q M T P L A M A A L S A G G P T D S D E Q D D G P G N V T S G G G M M M S M R
 
AT1G18835.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm010025_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sm001402_Selmo1    - - - - L K K R F R T K F T G D Q K E R M L A F A D K V G W K I Q K H D E A E V Q Q F C N E V G V K R H V L K V W M H N
Sb016496_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt003370_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp005070_Pp1s49    S P S A I K K R F R T K F T T E Q K D K M C A F A E K L G W R I Q K H D E A A V Q E F C T T V G V K R H V L K V W M H N
 
AT1G18835.1     - - - - - - - - -
gm010025_Glyma0    - - - - - - - - -
Sm001402_Selmo1    N K H T L G K K M
Sb016496_Sorbi1    - - - - - - - - -
pt003370_POPTR_    - - - - - - - - -
pp005070_Pp1s49    N K H T V G K K P
 
0