fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G18835.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp005070 not found in 350aa AT4G24660.1 1st_not 0.562130177 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G18835.1     --------------------MKK-------------------------------------
pp005070_Pp1s49 MDLGSGHESSNDQPQPEQPQMQTSPLPSLPAPIPMMLPSLGASNYHATPTSLHQQQQHHH
                                    *:.                                     

AT1G18835.1     -------------------------------------------------------RQVVI
pp005070_Pp1s49 HHHPHALHHDLPSATKLKLLNQNNTPSGNGGSVPTKYNDVKNSDQVATDQAREILRQAVV
                                                                       **.*:

AT1G18835.1     KQRKSSYTMTSSSSN------VRYVECQKNHAANIGGYAVDGCREFMASGGD---DALTC
pp005070_Pp1s49 TAVTESNAASTKAANAAKKGAVRYRECQKNHAAGMGGHAMDGCGEFMPGGGEGSVDALRC
                .  ..* : ::.::*      *** ********.:**:*:*** ***..**:   *** *

AT1G18835.1     AACGCHRNFHRREVDTEVVCEY------------------SPPNA---------------
pp005070_Pp1s49 AACNCHRNFHRREVEGEVLCDCKRKPKMGAPLGTGIVNTGQPPTLTSTTPVTTLALTASV
                ***.**********: **:*:                   .**.                

AT1G18835.1     ------------------------------------------------------------
pp005070_Pp1s49 AGQMTPLAMAALSAGGPTDSDEQDDGPGNVTSGGGMMMSMRSPSAIKKRFRTKFTTEQKD
                                                                            

AT1G18835.1     ----------------------------------------NN--------
pp005070_Pp1s49 KMCAFAEKLGWRIQKHDEAAVQEFCTTVGVKRHVLKVWMHNNKHTVGKKP
                                                        **
BoxShade v3.31 C (beta, 970507) Output
AT1G18835.1     - - - - - - - - - - - - - - - - - - - - M K K - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp005070_Pp1s49    M D L G S G H E S S N D Q P Q P E Q P Q M Q T S P L P S L P A P I P M M L P S L G A S N Y H A T P T S L H Q Q Q Q H H H
 
AT1G18835.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - R Q V V I
pp005070_Pp1s49    H H H P H A L H H D L P S A T K L K L L N Q N N T P S G N G G S V P T K Y N D V K N S D Q V A T D Q A R E I L R Q A V V
 
AT1G18835.1     K Q R K S S Y T M T S S S S N - - - - - - V R Y V E C Q K N H A A N I G G Y A V D G C R E F M A S G G D - - - D A L T C
pp005070_Pp1s49    T A V T E S N A A S T K A A N A A K K G A V R Y R E C Q K N H A A G M G G H A M D G C G E F M P G G G E G S V D A L R C
 
AT1G18835.1     A A C G C H R N F H R R E V D T E V V C E Y - - - - - - - - - - - - - - - - - - S P P N A - - - - - - - - - - - - - - -
pp005070_Pp1s49    A A C N C H R N F H R R E V E G E V L C D C K R K P K M G A P L G T G I V N T G Q P P T L T S T T P V T T L A L T A S V
 
AT1G18835.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp005070_Pp1s49    A G Q M T P L A M A A L S A G G P T D S D E Q D D G P G N V T S G G G M M M S M R S P S A I K K R F R T K F T T E Q K D
 
AT1G18835.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - N N - - - - - - - -
pp005070_Pp1s49    K M C A F A E K L G W R I Q K H D E A A V Q E F C T T V G V K R H V L K V W M H N N K H T V G K K P
 
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