fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G19180.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb023325 not found in 466aa AT1G19180.1 1st_1st 0.218813905 Ib
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G19180.1     MSSSMECSEFVGSRRFTGKKP-------SFSQTCSRLSQYLKENGSFGDLSL-GMACKPD
Sb023325_Sorbi1 --------EKGAAAAMAGRAPATARDKTSFAATCSLLSQYLKEKKDGGLQRLGGLAMAPA
                        *  .:  ::*: *       **: *** *******: . *   * *:*  * 

AT1G19180.1     VNGTLGNSRQPTTTMSLF-----PCEASNMDSMVQDVKPTNLFPRQPSFSSSSSSLPKED
Sb023325_Sorbi1 AGAGAGGFR-PPTTMNLLSALDAPAEEPTSDA----AKATVEEPKDHHKSTAGN--PRE-
                ...  *. * *.***.*:     *.* .. *:    .*.*   *::   *::..  *:* 

AT1G19180.1     VLKMTQTTRSVKPESQTAPLTIFYAGQVIVFNDFSAEKAKEVINLASKGTANSLAKNQTD
Sb023325_Sorbi1 ---------AAGDEAQQ--LTIFYGGKVVVFDKFPSTKVKDLLQIMNPG------GDRVD
                         :.  *:*   *****.*:*:**:.*.: *.*::::: . *       ::.*

AT1G19180.1     IRSNIATIANQVPHPRKTTTQEPIQSSPTP----LTELPIARRASLHRFLEKRKDRVTSK
Sb023325_Sorbi1 RAGATATV--------------PTQSLPTPSHNSLSDLPIARRNSLHRFLEKRKDRITAK
                  .  **:              * ** ***    *::****** ************:*:*

AT1G19180.1     APYQLCDPAKASSNPQTTGNMSWLGLAAEI-------
Sb023325_Sorbi1 APYQVNSSAGVEASFKV--EKPWLGLGQEAATVKQEM
                ****: ..* ..:. :.  : .****. *
BoxShade v3.31 C (beta, 970507) Output
AT1G19180.1     M S S S M E C S E F V G S R R F T G K K P - - - - - - - S F S Q T C S R L S Q Y L K E N G S F G D L S L - G M A C K P D
Sb023325_Sorbi1    - - - - - - - - E K G A A A A M A G R A P A T A R D K T S F A A T C S L L S Q Y L K E K K D G G L Q R L G G L A M A P A
 
AT1G19180.1     V N G T L G N S R Q P T T T M S L F - - - - - P C E A S N M D S M V Q D V K P T N L F P R Q P S F S S S S S S L P K E D
Sb023325_Sorbi1    A G A G A G G F R - P P T T M N L L S A L D A P A E E P T S D A - - - - A K A T V E E P K D H H K S T A G N - - P R E -
 
AT1G19180.1     V L K M T Q T T R S V K P E S Q T A P L T I F Y A G Q V I V F N D F S A E K A K E V I N L A S K G T A N S L A K N Q T D
Sb023325_Sorbi1    - - - - - - - - - A A G D E A Q Q - - L T I F Y G G K V V V F D K F P S T K V K D L L Q I M N P G - - - - - - G D R V D
 
AT1G19180.1     I R S N I A T I A N Q V P H P R K T T T Q E P I Q S S P T P - - - - L T E L P I A R R A S L H R F L E K R K D R V T S K
Sb023325_Sorbi1    R A G A T A T V - - - - - - - - - - - - - - P T Q S L P T P S H N S L S D L P I A R R N S L H R F L E K R K D R I T A K
 
AT1G19180.1     A P Y Q L C D P A K A S S N P Q T T G N M S W L G L A A E I - - - - - - -
Sb023325_Sorbi1    A P Y Q V N S S A G V E A S F K V - - E K P W L G L G Q E A A T V K Q E M
 
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