fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G19210.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm046016 not found in 198aa AT1G19210.1 1st_1st 0.494736842 Ia
Gm035637 not found in 199aa AT1G19210.1 not_1st 0.471052631 II
Gm024342 not found in 214aa AT1G19210.1 not_1st 0.421052631 II
Gm042563 not found in 205aa AT5G21960.1 not_not 0.415789473 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G19210.1     -----------MEGSSSSMQSKYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDTPEKAAR
gm035637_Glyma1 MMVKPSS-EKPEEHRDSK---YYKGVRKRKWGKWVSEIRLPNSRQRIWLGSFDTPEKAAR
gm024342_Glyma0 -MVKPKSVEKPAEEQQQRSVSSYRGVRKRKWGKYVSEIRLPNSRQRIWLGSYDSAEKAAR
gm046016_Glyma1 -MAKPSS-EKPEEHSDSK---YYKGVRKRKWGKWVSEIRLPNSRQRIWLGSYDTPEKAAR
gm042563_Glyma1 -MSK--------EHIITAIVIVHVGVRKRKWGKYVSEIRLPNSRQRIWLGSYDSAEKAAR
                            *         : *********:**********:******:*:.*****

AT1G19210.1     AFDAALYCLRGNNAKFNFPDNPPVISGGRNLSRSEIREAAARFANSAEDDSSGG------
gm035637_Glyma1 AFDAAMFCLRGRNAKFNFPDNPPDIAGGESMTPSQIQVAAAQFANAGPHEGHSGRPEHS-
gm024342_Glyma0 AFDAAMFCLRGSGAKFNFPSDPPNIAGGGNMTSSQIQIAAARFANSEPRNERSDQPVESL
gm046016_Glyma1 AFDAAMFCLRGRNAKFNFPDNPPDIAGGTSMTPSQIQIAAAQFANAGPHEGHSGRPEHP-
gm042563_Glyma1 AFDAAMFCLRGSGANFNFPSDRPNIAGGRNMTPSQIQIAAARFANSEPRKECSGKPVESL
                *****::**** .*:****.: * *:** .:: *:*: ***:***:   .  ..      

AT1G19210.1     ------AGYEIRQESASTS-------MDVDSEFLS-------MLPTVGSGNFASEFGLFP
gm035637_Glyma1 ---------PMQS----LSPSVSEGTVLTDSDVTTLNGSLTDLFTPVGSSGYASDYGIFP
gm024342_Glyma0 TSDEETASFPVISDTDTSSPPLSDVTFQNDAELVT--GSFPDMFSDFGSGDFVPDFSDFP
gm046016_Glyma1 ---------PMES----PSPSVSEGTIQTDSDVPTLNGSVTDLFTPVGSSGYASDYGIFP
gm042563_Glyma1 TSIEETTSFPVNSDTDTSS-PLSVVTIQNDTEVAT--GSFPGIFSGFGSGNFVPEFSDFP
                          : .     *       .  *::. :       ::. .**..:..::. **

AT1G19210.1     GFDDFSDEYSGDRFREQLSPTQDYYQLGEETYADGSM----FLWNF
gm035637_Glyma1 GVDDF----SGGFYVPEM-LNFNY---GEEN-GEGFIVDESFLWNF
gm024342_Glyma0 SFDDF----SRDFFLHEL-PGFNF---GEEN-LDGLIIQDSFLWNF
gm046016_Glyma1 GFDDF----SGDFYVPEM-PNVNY---GEEN-GEGFIVDESFLWNF
gm042563_Glyma1 SFDDF----GHDFFVHEL-PGFDY---GEEN-LDGLIIQDSFLWNF
                ..***    . . :  ::    ::   ***.  :* :    *****
BoxShade v3.31 C (beta, 970507) Output
AT1G19210.1     - - - - - - - - - - - M E G S S S S M Q S K Y K G V R K R K W G K W V S E I R L P N S R E R I W L G S Y D T P E K A A R
gm035637_Glyma1    M M V K P S S - E K P E E H R D S K - - - Y Y K G V R K R K W G K W V S E I R L P N S R Q R I W L G S F D T P E K A A R
gm024342_Glyma0    - M V K P K S V E K P A E E Q Q Q R S V S S Y R G V R K R K W G K Y V S E I R L P N S R Q R I W L G S Y D S A E K A A R
gm046016_Glyma1    - M A K P S S - E K P E E H S D S K - - - Y Y K G V R K R K W G K W V S E I R L P N S R Q R I W L G S Y D T P E K A A R
gm042563_Glyma1    - M S K - - - - - - - - E H I I T A I V I V H V G V R K R K W G K Y V S E I R L P N S R Q R I W L G S Y D S A E K A A R
 
AT1G19210.1     A F D A A L Y C L R G N N A K F N F P D N P P V I S G G R N L S R S E I R E A A A R F A N S A E D D S S G G - - - - - -
gm035637_Glyma1    A F D A A M F C L R G R N A K F N F P D N P P D I A G G E S M T P S Q I Q V A A A Q F A N A G P H E G H S G R P E H S -
gm024342_Glyma0    A F D A A M F C L R G S G A K F N F P S D P P N I A G G G N M T S S Q I Q I A A A R F A N S E P R N E R S D Q P V E S L
gm046016_Glyma1    A F D A A M F C L R G R N A K F N F P D N P P D I A G G T S M T P S Q I Q I A A A Q F A N A G P H E G H S G R P E H P -
gm042563_Glyma1    A F D A A M F C L R G S G A N F N F P S D R P N I A G G R N M T P S Q I Q I A A A R F A N S E P R K E C S G K P V E S L
 
AT1G19210.1     - - - - - - A G Y E I R Q E S A S T S - - - - - - - M D V D S E F L S - - - - - - - M L P T V G S G N F A S E F G L F P
gm035637_Glyma1    - - - - - - - - - P M Q S - - - - L S P S V S E G T V L T D S D V T T L N G S L T D L F T P V G S S G Y A S D Y G I F P
gm024342_Glyma0    T S D E E T A S F P V I S D T D T S S P P L S D V T F Q N D A E L V T - - G S F P D M F S D F G S G D F V P D F S D F P
gm046016_Glyma1    - - - - - - - - - P M E S - - - - P S P S V S E G T I Q T D S D V P T L N G S V T D L F T P V G S S G Y A S D Y G I F P
gm042563_Glyma1    T S I E E T T S F P V N S D T D T S S - P L S V V T I Q N D T E V A T - - G S F P G I F S G F G S G N F V P E F S D F P
 
AT1G19210.1     G F D D F S D E Y S G D R F R E Q L S P T Q D Y Y Q L G E E T Y A D G S M - - - - F L W N F
gm035637_Glyma1    G V D D F - - - - S G G F Y V P E M - L N F N Y - - - G E E N - G E G F I V D E S F L W N F
gm024342_Glyma0    S F D D F - - - - S R D F F L H E L - P G F N F - - - G E E N - L D G L I I Q D S F L W N F
gm046016_Glyma1    G F D D F - - - - S G D F Y V P E M - P N V N Y - - - G E E N - G E G F I V D E S F L W N F
gm042563_Glyma1    S F D D F - - - - G H D F F V H E L - P G F D Y - - - G E E N - L D G L I I Q D S F L W N F
 
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