fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G19350.1 DVAMEDLELTLGNGKA at 322/335 in AT1G19350.4
DVAMEDLELTLGNGKA at 344/357 in AT1G19350.3
DVAMEDLELTLGNGKA at 322/335 in AT1G19350.5
DVAMEDLELTLGNGKA at 322/335 in AT1G19350.1
DVAMEDLELTLGNGKA at 322/335 in AT1G19350.6
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os028778 EVAAEELELTLGVGAK in 288/298 AT1G19350.6 1st_not 0.436229205 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G19350.1     MTSDGATSTSAAAAAAAMATRRKPSWRERENNRRRERRRRAVAAKIYTGLRAQGNYNLPK
Os028778_Os07t0 -------MTSGAAAAG-----RTPTWKERENNKRRERRRRAIAAKIFTGLRALGNYNLPK
                        **.****.     *.*:*:*****:********:****:***** *******

AT1G19350.1     HCDNNEVLKALCSEAGWVVEEDGTTYRKGHKPLPGDMAGSSSRATPYSSHN-QSPLSSTF
Os028778_Os07t0 HCDNNEVLKALCREAGWVVEDDGTTYRKGCKPPPSSAGGASVGMSPCSSTQLLSAPSSSF
                ************ *******:******** ** *.. .*:*   :* ** :  *. **:*

AT1G19350.1     DSPILSYQVSPSSSSFPSPSRVGDPHNISTIFPFLRNGGIPSSLPPLRISNSAPVTPPVS
Os028778_Os07t0 PSPVPSYHASPASSSFPSPSRIDNP-SASCLLPFLR--GLP-NLPPLRVSSSAPVTPPLS
                 **: **:.**:*********:.:* . * ::****  *:* .*****:*.*******:*

AT1G19350.1     SPTSRNPKPL--PTWESFTKQSMSMAAKQSMTSLNYPFYAVSAPASPTHHRQFHAPATIP
Os028778_Os07t0 SPTASRPPKIRKPDWD--------------VDPFRHPFFAVSAPASPTRGRRLEHPDTIP
                ***: .*  :  * *:              : .:.:**:*********: *::. * ***

AT1G19350.1     ECDESDSSTVDSGHWISFQKFAQQQPFSASMVPTSPTFNLVKPAPQQLSPNTAAIQEIG-
Os028778_Os07t0 ECDESDVSTVDSGRWISFQM--------ATTAPTSPTYNLVNPGAS--TSNSMEIEGTAG
                ****** ******:*****         *: .*****:***:*...  :.*:  *:  . 

AT1G19350.1     -QSSEFKFENSQVKPWEGERIHDVAMEDLELTLGNGKAHS
Os028778_Os07t0 RGGAEFEFDKGRVTPWEGERIHEVAAEELELTLGVGAK--
                  .:**:*::.:*.********:** *:****** *
BoxShade v3.31 C (beta, 970507) Output
AT1G19350.1     M T S D G A T S T S A A A A A A A M A T R R K P S W R E R E N N R R R E R R R R A V A A K I Y T G L R A Q G N Y N L P K
Os028778_Os07t0    - - - - - - - M T S G A A A A G - - - - - R T P T W K E R E N N K R R E R R R R A I A A K I F T G L R A L G N Y N L P K
 
AT1G19350.1     H C D N N E V L K A L C S E A G W V V E E D G T T Y R K G H K P L P G D M A G S S S R A T P Y S S H N - Q S P L S S T F
Os028778_Os07t0    H C D N N E V L K A L C R E A G W V V E D D G T T Y R K G C K P P P S S A G G A S V G M S P C S S T Q L L S A P S S S F
 
AT1G19350.1     D S P I L S Y Q V S P S S S S F P S P S R V G D P H N I S T I F P F L R N G G I P S S L P P L R I S N S A P V T P P V S
Os028778_Os07t0    P S P V P S Y H A S P A S S S F P S P S R I D N P - S A S C L L P F L R - - G L P - N L P P L R V S S S A P V T P P L S
 
AT1G19350.1     S P T S R N P K P L - - P T W E S F T K Q S M S M A A K Q S M T S L N Y P F Y A V S A P A S P T H H R Q F H A P A T I P
Os028778_Os07t0    S P T A S R P P K I R K P D W D - - - - - - - - - - - - - - V D P F R H P F F A V S A P A S P T R G R R L E H P D T I P
 
AT1G19350.1     E C D E S D S S T V D S G H W I S F Q K F A Q Q Q P F S A S M V P T S P T F N L V K P A P Q Q L S P N T A A I Q E I G -
Os028778_Os07t0    E C D E S D V S T V D S G R W I S F Q M - - - - - - - - A T T A P T S P T Y N L V N P G A S - - T S N S M E I E G T A G
 
AT1G19350.1     - Q S S E F K F E N S Q V K P W E G E R I H D V A M E D L E L T L G N G K A H S
Os028778_Os07t0    R G G A E F E F D K G R V T P W E G E R I H E V A A E E L E L T L G V G A K - -
 
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