fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G19490.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm052618 not found in 352aa AT1G19490.1 1st_1st 0.193846153 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G19490.1     MELEPISSSCCSSSSSSSGEENTAAANMTEMEAAEALADLAQLAIMREQVFESAASWGSK
gm052618_Glyma1 ---------------------------------------------MVKHVFHTRQS----
                                                             * ::**.:  *    

AT1G19490.1     GKRVRKRVKTESPPSDSLLKPPDSDTLPTPDLAEERLVKEEEEEEEVEPITKELTKAPVK
gm052618_Glyma1 ---------------------------------EQKFGYKQ-------------------
                                                 *:::  ::                   

AT1G19490.1     SEINGETPKPILASTLIRCSRSNGCGRSRQNLSEAEREERRIRRILANRESARQTIRRRQ
gm052618_Glyma1 -----------LDSSF--------------------------------------------
                           * *::                                            

AT1G19490.1     AMCEELSKKAADLTYENENLRREKDWALKEFQSLETINKHLKEQVLKSVKPDTKEPEESP
gm052618_Glyma1 ALCEELTRKAATLVAENENLKREKELALKEYESLETTNKNLKTQIAKSINTEVEKTPVEP
                *:****::*** *. *****:***: ****::**** **:** *: **::.:.::.  .*

AT1G19490.1     KPSQVEMSTSS--TPFYFYNQNPYQLFCWPHVTQSSNPM------ISPLEFPTSGGA--S
gm052618_Glyma1 VSSVAEITPSSGNGPWFLYNHFPVSQIFWPSILQSSNPVHLQNTSFNSIAIPPNANVPCS
                 .* .*::.**   *:::**: * . : ** : *****:      :..: :*.....  *

AT1G19490.1     AKTITTQEHENAADDNGQKTHFYVVPCPWFLPPPDHSNGVPF---GLQDTQR--------
gm052618_Glyma1 SESESRHKQNNLINDNRTQNPFYMFPCPWLFPLPQFGNGQSSPSNSLKDEQDNLSLCKPC
                ::: : ::::*  :**  :. **:.****::* *:..** .    .*:* *         

AT1G19490.1     ------GTFSNGHHIDDSSARPMDVTETPRSHLPTRIKEEDSGSPETRPLYDLNESATEV
gm052618_Glyma1 SSSSSLNTLAN---VDYQAA------------LPIKLKTEACGWTEAIPINNPGCATPRS
                      .*::*   :* .:*            ** ::* * .* .*: *: : . ::.. 

AT1G19490.1     LSEGGD--------------GFPVTQQAYSLKHED----VSETTNGVTLMPPGHHVLISL
gm052618_Glyma1 SLDGGEKKTGCYIIEKYHGPALGCNGHASAVKQEHDFQLLSAPNNKVSSIA---YISTSS
                  :**:              .:  . :* ::*:*.    :* ..* *: :.   ::  * 

AT1G19490.1     PEKKH-----------GSLAAAEARKRRKELTRLKNLHGRQCRMQVG
gm052618_Glyma1 LEKKQEKFICQEKNLVDAVAAAEARKRRKELTKQKSIHNRQSRMHC-
                 ***:           .::*************: *.:*.**.**:
BoxShade v3.31 C (beta, 970507) Output
AT1G19490.1     M E L E P I S S S C C S S S S S S S G E E N T A A A N M T E M E A A E A L A D L A Q L A I M R E Q V F E S A A S W G S K
gm052618_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M V K H V F H T R Q S - - - -
 
AT1G19490.1     G K R V R K R V K T E S P P S D S L L K P P D S D T L P T P D L A E E R L V K E E E E E E E V E P I T K E L T K A P V K
gm052618_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - E Q K F G Y K Q - - - - - - - - - - - - - - - - - - -
 
AT1G19490.1     S E I N G E T P K P I L A S T L I R C S R S N G C G R S R Q N L S E A E R E E R R I R R I L A N R E S A R Q T I R R R Q
gm052618_Glyma1    - - - - - - - - - - - L D S S F - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT1G19490.1     A M C E E L S K K A A D L T Y E N E N L R R E K D W A L K E F Q S L E T I N K H L K E Q V L K S V K P D T K E P E E S P
gm052618_Glyma1    A L C E E L T R K A A T L V A E N E N L K R E K E L A L K E Y E S L E T T N K N L K T Q I A K S I N T E V E K T P V E P
 
AT1G19490.1     K P S Q V E M S T S S - - T P F Y F Y N Q N P Y Q L F C W P H V T Q S S N P M - - - - - - I S P L E F P T S G G A - - S
gm052618_Glyma1    V S S V A E I T P S S G N G P W F L Y N H F P V S Q I F W P S I L Q S S N P V H L Q N T S F N S I A I P P N A N V P C S
 
AT1G19490.1     A K T I T T Q E H E N A A D D N G Q K T H F Y V V P C P W F L P P P D H S N G V P F - - - G L Q D T Q R - - - - - - - -
gm052618_Glyma1    S E S E S R H K Q N N L I N D N R T Q N P F Y M F P C P W L F P L P Q F G N G Q S S P S N S L K D E Q D N L S L C K P C
 
AT1G19490.1     - - - - - - G T F S N G H H I D D S S A R P M D V T E T P R S H L P T R I K E E D S G S P E T R P L Y D L N E S A T E V
gm052618_Glyma1    S S S S S L N T L A N - - - V D Y Q A A - - - - - - - - - - - - L P I K L K T E A C G W T E A I P I N N P G C A T P R S
 
AT1G19490.1     L S E G G D - - - - - - - - - - - - - - G F P V T Q Q A Y S L K H E D - - - - V S E T T N G V T L M P P G H H V L I S L
gm052618_Glyma1    S L D G G E K K T G C Y I I E K Y H G P A L G C N G H A S A V K Q E H D F Q L L S A P N N K V S S I A - - - Y I S T S S
 
AT1G19490.1     P E K K H - - - - - - - - - - - G S L A A A E A R K R R K E L T R L K N L H G R Q C R M Q V G
gm052618_Glyma1    L E K K Q E K F I C Q E K N L V D A V A A A E A R K R R K E L T K Q K S I H N R Q S R M H C -
 
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