fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G19510.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os022978 not found in 111aa AT1G75250.1 1st_not 0.502824858 II
Os022977 not found in 90aa AT1G75250.2 not_not 0.491525423 III
Os002918 not found in 85aa AT2G21650.1 not_not 0.491525423 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G19510.1     MAS----------SSMSSSSS-----WTSKQNKMFERALAVYDKDTPDRWQNVAKAV-GS
Os002918_Os01t0 MAS----------MSVSSSRA---PQWTARQNEQFERALAVYDRDTPERWHNIARAV-AG
Os022978_Os05t0 MASAAGSKQQQAMMSLPSSRGGGGGGWTQRQNKQFECALAVYDKETPDRWHNIARYMGGA
Os022977_Os05t0 MA--------------QQARA----QWPQKQNKLFEQALAVYDKETPDRWHNIARAVGGG
                **               .: .     *. :**: ** ******::**:**:*:*: : ..

AT1G19510.1     KSAEEVKRHYDILVEDLMNIEQDLVPLPKYKTVDVGSKSRGIDDFDLRLMKNMRIQ
Os002918_Os01t0 KSADEVKLYYDLLVEDVKRIETGKVPFPAYRCP---QPAIAG--------------
Os022978_Os05t0 KSADEVRRHFDHLVEDVSRIESGRVPFPRYSSS---SSSRGADDGN--RSRYLKYQ
Os022977_Os05t0 KSAEDVKRYYEMLEEDIKHIESGKVPFPAYRC-----PAAAGYQAE--RLKHLKI-
                ***::*: ::: * **: .** . **:* *        : .
BoxShade v3.31 C (beta, 970507) Output
AT1G19510.1     M A S - - - - - - - - - - S S M S S S S S - - - - - W T S K Q N K M F E R A L A V Y D K D T P D R W Q N V A K A V - G S
Os002918_Os01t0    M A S - - - - - - - - - - M S V S S S R A - - - P Q W T A R Q N E Q F E R A L A V Y D R D T P E R W H N I A R A V - A G
Os022978_Os05t0    M A S A A G S K Q Q Q A M M S L P S S R G G G G G G W T Q R Q N K Q F E C A L A V Y D K E T P D R W H N I A R Y M G G A
Os022977_Os05t0    M A - - - - - - - - - - - - - - Q Q A R A - - - - Q W P Q K Q N K L F E Q A L A V Y D K E T P D R W H N I A R A V G G G
 
AT1G19510.1     K S A E E V K R H Y D I L V E D L M N I E Q D L V P L P K Y K T V D V G S K S R G I D D F D L R L M K N M R I Q
Os002918_Os01t0    K S A D E V K L Y Y D L L V E D V K R I E T G K V P F P A Y R C P - - - Q P A I A G - - - - - - - - - - - - - -
Os022978_Os05t0    K S A D E V R R H F D H L V E D V S R I E S G R V P F P R Y S S S - - - S S S R G A D D G N - - R S R Y L K Y Q
Os022977_Os05t0    K S A E D V K R Y Y E M L E E D I K H I E S G K V P F P A Y R C - - - - - P A A A G Y Q A E - - R L K H L K I -
 
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