fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G19510.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb033118 not found in 238aa AT1G75250.1 1st_not 0.502824858 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G19510.1     --------------------------------------------MASSSMSSSSSW----
Sb033118_Sorbi1 FLLSHHYLQLQLGPLHACCPINPIYTHVCIFWIIDRSSYYVHHLRRSSDVSACMSGGPVA
                                                              **.:*:. *     

AT1G19510.1     ----TSKQNKMFERALAVYD------KDTPDRWQNVAKAVGSKS-AEEVKRHYDILVEDL
Sb033118_Sorbi1 GGAAVGREGHL--AGLDVADVLLQQVVVAPDVLGGLAAADGAGDVVPPVRR---VLVVNG
                    ..::.::   .* * *        :**   .:* * *: . .  *:*   :** : 

AT1G19510.1     MNIEQDLVPLPKYKTVDVGSKSRGIDDFDLRLMKNMRIQ--
Sb033118_Sorbi1 QRLLEQLVLLRRPLRARRCARHRLHRRHSVAFLELAREEGS
                 .: ::** * :   .   :: *    ..: :::  * :
BoxShade v3.31 C (beta, 970507) Output
AT1G19510.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A S S S M S S S S S W - - - -
Sb033118_Sorbi1    F L L S H H Y L Q L Q L G P L H A C C P I N P I Y T H V C I F W I I D R S S Y Y V H H L R R S S D V S A C M S G G P V A
 
AT1G19510.1     - - - - T S K Q N K M F E R A L A V Y D - - - - - - K D T P D R W Q N V A K A V G S K S - A E E V K R H Y D I L V E D L
Sb033118_Sorbi1    G G A A V G R E G H L - - A G L D V A D V L L Q Q V V V A P D V L G G L A A A D G A G D V V P P V R R - - - V L V V N G
 
AT1G19510.1     M N I E Q D L V P L P K Y K T V D V G S K S R G I D D F D L R L M K N M R I Q - -
Sb033118_Sorbi1    Q R L L E Q L V L L R R P L R A R R C A R H R L H R R H S V A F L E L A R E E G S
 
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