fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G19510.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb008392 not found in 98aa AT2G21650.1 not_not 0.491525423 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G19510.1     MASSSMSSS-SSWTSKQNKMFERALAVYDKDTPDRWQNVAKAV-GSKSAEEVKRHYDILV
Sb008392_Sorbi1 MATMSLSSTRAQWTAKQNKLFEQALAVYDRDTPDRWHNIARAVGGGKSADEVRRYYELLV
                **: *:**: :.**:****:**:******:******:*:*:** *.***:**:*:*::**

AT1G19510.1     EDLMNIEQDLVPLPKYKTVDVGSKSRGIDDFDLRLMKNMRIQ
Sb008392_Sorbi1 KDVEHIEAGKVPFPAYR-CPAGYDADRIDRSP--ALKHLKI-
                :*: :** . **:* *:   .* .:  **      :*:::*
BoxShade v3.31 C (beta, 970507) Output
AT1G19510.1     M A S S S M S S S - S S W T S K Q N K M F E R A L A V Y D K D T P D R W Q N V A K A V - G S K S A E E V K R H Y D I L V
Sb008392_Sorbi1    M A T M S L S S T R A Q W T A K Q N K L F E Q A L A V Y D R D T P D R W H N I A R A V G G G K S A D E V R R Y Y E L L V
 
AT1G19510.1     E D L M N I E Q D L V P L P K Y K T V D V G S K S R G I D D F D L R L M K N M R I Q
Sb008392_Sorbi1    K D V E H I E A G K V P F P A Y R - C P A G Y D A D R I D R S P - - A L K H L K I -
 
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