fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G19860.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt000012 not found in 420aa AT1G19860.1 1st_1st 0.407090464 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G19860.1     MRALH--KRVSWPPDFKLCQVRLFISEDSPSQVGSESQDHLQAKSPLASHP--SDDNLPP
pt000012_POPTR_ MRGLRKSKRVCWASDVNLCQVRLFLSEESPSLVGSGAQDHLQAKSSWPSHSAGTDDFQPP
                **.*:  ***.*..*.:*******:**:*** *** :********. .**.  :**  **

AT1G19860.1     GFGGPFSANESQIKLSDIPLIKWKCSVQILLDREWKVVAGDESKEVEAQNERELRVLEAF
pt000012_POPTR_ GFEGGHPASQLQIKVSEIPVIKWRCPPRLVLNLTWQVVSGEESKDMEFQNQREIRVLEAV
                ** * ..*.: ***:*:**:***:*. :::*:  *:**:*:***::* **:**:*****.

AT1G19860.1     YPGASSIPPNPSVPADVEDSHHDDQQTIVIPILPVEDDDIA-------------MDS---
pt000012_POPTR_ YPRPSAIPPNPAFSVDLESSQHNDHQIPLIPITPIEDEDAAEEPSDVMGPSMGPMSSQAQ
                ** .*:*****:...*:*.*:*:*:*  :*** *:**:* *             *.*   

AT1G19860.1     --ASDFP-TQSGVDVGTEPSITDENTSTSSTLPA-GPDIMAALS---AISNSKEQGSMID
pt000012_POPTR_ LLASGVPSSQSSI-----PSIPNEK-PTAGLLPGVEPGAVAAASAAFAAVKSNEQGSLID
                  **..* :**.:     ***.:*: .*:. **.  *. :** *   *  :*:****:**

AT1G19860.1     QDLLIKILSNPKLVENLVANRGSAGSVSSNTSSLYSSSTHEANGVVTTAPISSNGQFYAQ
pt000012_POPTR_ HDLLIKILSNPKLVEKLVTDYGAVANAQNIPKPPLAESITQAS--LTATP---SGSFYTQ
                :**************:**:: *:...... ...  :.*  :*.  :*::*   .*.**:*

AT1G19860.1     PPITHI---PPMAYTPHAPQDQPNYGAPPARDASYYKNLIQQHGGDRQETPPVQHLGYRY
pt000012_POPTR_ PNGTGIGVLPSARVLPPGVPSSPSIGATQTKDMSYYKNLIQQHGGDRQETP--QQFGGRY
                *  * *   *.    * .  ..*. **. ::* ******************  *::* **

AT1G19860.1     NLQPGGGPNPEMVNSSNNNQRPRDSKPKIMKACMYFNSARGCRHGANCMYQHDATPYQPR
pt000012_POPTR_ NHQI--GTSQDLVNS-----KSRESKHKIMKPCIYFNTPRGCRNGANCAYQHDSSSQKKG
                * *   *.. ::***     :.*:** ****.*:***:.****:**** ****::. :  

AT1G19860.1     NLNNGNINTSDMQNAKRMRFDRD---
pt000012_POPTR_ S------SIAEVQSAKRMKMDREISS
                .      . :::*.****::**:
BoxShade v3.31 C (beta, 970507) Output
AT1G19860.1     M R A L H - - K R V S W P P D F K L C Q V R L F I S E D S P S Q V G S E S Q D H L Q A K S P L A S H P - - S D D N L P P
pt000012_POPTR_    M R G L R K S K R V C W A S D V N L C Q V R L F L S E E S P S L V G S G A Q D H L Q A K S S W P S H S A G T D D F Q P P
 
AT1G19860.1     G F G G P F S A N E S Q I K L S D I P L I K W K C S V Q I L L D R E W K V V A G D E S K E V E A Q N E R E L R V L E A F
pt000012_POPTR_    G F E G G H P A S Q L Q I K V S E I P V I K W R C P P R L V L N L T W Q V V S G E E S K D M E F Q N Q R E I R V L E A V
 
AT1G19860.1     Y P G A S S I P P N P S V P A D V E D S H H D D Q Q T I V I P I L P V E D D D I A - - - - - - - - - - - - - M D S - - -
pt000012_POPTR_    Y P R P S A I P P N P A F S V D L E S S Q H N D H Q I P L I P I T P I E D E D A A E E P S D V M G P S M G P M S S Q A Q
 
AT1G19860.1     - - A S D F P - T Q S G V D V G T E P S I T D E N T S T S S T L P A - G P D I M A A L S - - - A I S N S K E Q G S M I D
pt000012_POPTR_    L L A S G V P S S Q S S I - - - - - P S I P N E K - P T A G L L P G V E P G A V A A A S A A F A A V K S N E Q G S L I D
 
AT1G19860.1     Q D L L I K I L S N P K L V E N L V A N R G S A G S V S S N T S S L Y S S S T H E A N G V V T T A P I S S N G Q F Y A Q
pt000012_POPTR_    H D L L I K I L S N P K L V E K L V T D Y G A V A N A Q N I P K P P L A E S I T Q A S - - L T A T P - - - S G S F Y T Q
 
AT1G19860.1     P P I T H I - - - P P M A Y T P H A P Q D Q P N Y G A P P A R D A S Y Y K N L I Q Q H G G D R Q E T P P V Q H L G Y R Y
pt000012_POPTR_    P N G T G I G V L P S A R V L P P G V P S S P S I G A T Q T K D M S Y Y K N L I Q Q H G G D R Q E T P - - Q Q F G G R Y
 
AT1G19860.1     N L Q P G G G P N P E M V N S S N N N Q R P R D S K P K I M K A C M Y F N S A R G C R H G A N C M Y Q H D A T P Y Q P R
pt000012_POPTR_    N H Q I - - G T S Q D L V N S - - - - - K S R E S K H K I M K P C I Y F N T P R G C R N G A N C A Y Q H D S S S Q K K G
 
AT1G19860.1     N L N N G N I N T S D M Q N A K R M R F D R D - - -
pt000012_POPTR_    S - - - - - - S I A E V Q S A K R M K M D R E I S S
 
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