Input
| Putative repression domain
|
|
AT1G19860.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt000012 |
not found in 420aa |
AT1G19860.1 |
1st_1st |
0.407090464 |
Ia |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT1G19860.1 MRALH--KRVSWPPDFKLCQVRLFISEDSPSQVGSESQDHLQAKSPLASHP--SDDNLPP
pt000012_POPTR_ MRGLRKSKRVCWASDVNLCQVRLFLSEESPSLVGSGAQDHLQAKSSWPSHSAGTDDFQPP
**.*: ***.*..*.:*******:**:*** *** :********. .**. :** **
AT1G19860.1 GFGGPFSANESQIKLSDIPLIKWKCSVQILLDREWKVVAGDESKEVEAQNERELRVLEAF
pt000012_POPTR_ GFEGGHPASQLQIKVSEIPVIKWRCPPRLVLNLTWQVVSGEESKDMEFQNQREIRVLEAV
** * ..*.: ***:*:**:***:*. :::*: *:**:*:***::* **:**:*****.
AT1G19860.1 YPGASSIPPNPSVPADVEDSHHDDQQTIVIPILPVEDDDIA-------------MDS---
pt000012_POPTR_ YPRPSAIPPNPAFSVDLESSQHNDHQIPLIPITPIEDEDAAEEPSDVMGPSMGPMSSQAQ
** .*:*****:...*:*.*:*:*:* :*** *:**:* * *.*
AT1G19860.1 --ASDFP-TQSGVDVGTEPSITDENTSTSSTLPA-GPDIMAALS---AISNSKEQGSMID
pt000012_POPTR_ LLASGVPSSQSSI-----PSIPNEK-PTAGLLPGVEPGAVAAASAAFAAVKSNEQGSLID
**..* :**.: ***.:*: .*:. **. *. :** * * :*:****:**
AT1G19860.1 QDLLIKILSNPKLVENLVANRGSAGSVSSNTSSLYSSSTHEANGVVTTAPISSNGQFYAQ
pt000012_POPTR_ HDLLIKILSNPKLVEKLVTDYGAVANAQNIPKPPLAESITQAS--LTATP---SGSFYTQ
:**************:**:: *:...... ... :.* :*. :*::* .*.**:*
AT1G19860.1 PPITHI---PPMAYTPHAPQDQPNYGAPPARDASYYKNLIQQHGGDRQETPPVQHLGYRY
pt000012_POPTR_ PNGTGIGVLPSARVLPPGVPSSPSIGATQTKDMSYYKNLIQQHGGDRQETP--QQFGGRY
* * * *. * . ..*. **. ::* ****************** *::* **
AT1G19860.1 NLQPGGGPNPEMVNSSNNNQRPRDSKPKIMKACMYFNSARGCRHGANCMYQHDATPYQPR
pt000012_POPTR_ NHQI--GTSQDLVNS-----KSRESKHKIMKPCIYFNTPRGCRNGANCAYQHDSSSQKKG
* * *.. ::*** :.*:** ****.*:***:.****:**** ****::. :
AT1G19860.1 NLNNGNINTSDMQNAKRMRFDRD---
pt000012_POPTR_ S------SIAEVQSAKRMKMDREISS
. . :::*.****::**:
BoxShade v3.31 C (beta, 970507) Output
AT1G19860.1 |
M |
R |
A |
L |
H |
- |
- |
K |
R |
V |
S |
W |
P |
P |
D |
F |
K |
L |
C |
Q |
V |
R |
L |
F |
I |
S |
E |
D |
S |
P |
S |
Q |
V |
G |
S |
E |
S |
Q |
D |
H |
L |
Q |
A |
K |
S |
P |
L |
A |
S |
H |
P |
- |
- |
S |
D |
D |
N |
L |
P |
P |
pt000012_POPTR_ |
M |
R |
G |
L |
R |
K |
S |
K |
R |
V |
C |
W |
A |
S |
D |
V |
N |
L |
C |
Q |
V |
R |
L |
F |
L |
S |
E |
E |
S |
P |
S |
L |
V |
G |
S |
G |
A |
Q |
D |
H |
L |
Q |
A |
K |
S |
S |
W |
P |
S |
H |
S |
A |
G |
T |
D |
D |
F |
Q |
P |
P |
|
AT1G19860.1 |
G |
F |
G |
G |
P |
F |
S |
A |
N |
E |
S |
Q |
I |
K |
L |
S |
D |
I |
P |
L |
I |
K |
W |
K |
C |
S |
V |
Q |
I |
L |
L |
D |
R |
E |
W |
K |
V |
V |
A |
G |
D |
E |
S |
K |
E |
V |
E |
A |
Q |
N |
E |
R |
E |
L |
R |
V |
L |
E |
A |
F |
pt000012_POPTR_ |
G |
F |
E |
G |
G |
H |
P |
A |
S |
Q |
L |
Q |
I |
K |
V |
S |
E |
I |
P |
V |
I |
K |
W |
R |
C |
P |
P |
R |
L |
V |
L |
N |
L |
T |
W |
Q |
V |
V |
S |
G |
E |
E |
S |
K |
D |
M |
E |
F |
Q |
N |
Q |
R |
E |
I |
R |
V |
L |
E |
A |
V |
|
AT1G19860.1 |
Y |
P |
G |
A |
S |
S |
I |
P |
P |
N |
P |
S |
V |
P |
A |
D |
V |
E |
D |
S |
H |
H |
D |
D |
Q |
Q |
T |
I |
V |
I |
P |
I |
L |
P |
V |
E |
D |
D |
D |
I |
A |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
M |
D |
S |
- |
- |
- |
pt000012_POPTR_ |
Y |
P |
R |
P |
S |
A |
I |
P |
P |
N |
P |
A |
F |
S |
V |
D |
L |
E |
S |
S |
Q |
H |
N |
D |
H |
Q |
I |
P |
L |
I |
P |
I |
T |
P |
I |
E |
D |
E |
D |
A |
A |
E |
E |
P |
S |
D |
V |
M |
G |
P |
S |
M |
G |
P |
M |
S |
S |
Q |
A |
Q |
|
AT1G19860.1 |
- |
- |
A |
S |
D |
F |
P |
- |
T |
Q |
S |
G |
V |
D |
V |
G |
T |
E |
P |
S |
I |
T |
D |
E |
N |
T |
S |
T |
S |
S |
T |
L |
P |
A |
- |
G |
P |
D |
I |
M |
A |
A |
L |
S |
- |
- |
- |
A |
I |
S |
N |
S |
K |
E |
Q |
G |
S |
M |
I |
D |
pt000012_POPTR_ |
L |
L |
A |
S |
G |
V |
P |
S |
S |
Q |
S |
S |
I |
- |
- |
- |
- |
- |
P |
S |
I |
P |
N |
E |
K |
- |
P |
T |
A |
G |
L |
L |
P |
G |
V |
E |
P |
G |
A |
V |
A |
A |
A |
S |
A |
A |
F |
A |
A |
V |
K |
S |
N |
E |
Q |
G |
S |
L |
I |
D |
|
AT1G19860.1 |
Q |
D |
L |
L |
I |
K |
I |
L |
S |
N |
P |
K |
L |
V |
E |
N |
L |
V |
A |
N |
R |
G |
S |
A |
G |
S |
V |
S |
S |
N |
T |
S |
S |
L |
Y |
S |
S |
S |
T |
H |
E |
A |
N |
G |
V |
V |
T |
T |
A |
P |
I |
S |
S |
N |
G |
Q |
F |
Y |
A |
Q |
pt000012_POPTR_ |
H |
D |
L |
L |
I |
K |
I |
L |
S |
N |
P |
K |
L |
V |
E |
K |
L |
V |
T |
D |
Y |
G |
A |
V |
A |
N |
A |
Q |
N |
I |
P |
K |
P |
P |
L |
A |
E |
S |
I |
T |
Q |
A |
S |
- |
- |
L |
T |
A |
T |
P |
- |
- |
- |
S |
G |
S |
F |
Y |
T |
Q |
|
AT1G19860.1 |
P |
P |
I |
T |
H |
I |
- |
- |
- |
P |
P |
M |
A |
Y |
T |
P |
H |
A |
P |
Q |
D |
Q |
P |
N |
Y |
G |
A |
P |
P |
A |
R |
D |
A |
S |
Y |
Y |
K |
N |
L |
I |
Q |
Q |
H |
G |
G |
D |
R |
Q |
E |
T |
P |
P |
V |
Q |
H |
L |
G |
Y |
R |
Y |
pt000012_POPTR_ |
P |
N |
G |
T |
G |
I |
G |
V |
L |
P |
S |
A |
R |
V |
L |
P |
P |
G |
V |
P |
S |
S |
P |
S |
I |
G |
A |
T |
Q |
T |
K |
D |
M |
S |
Y |
Y |
K |
N |
L |
I |
Q |
Q |
H |
G |
G |
D |
R |
Q |
E |
T |
P |
- |
- |
Q |
Q |
F |
G |
G |
R |
Y |
|
AT1G19860.1 |
N |
L |
Q |
P |
G |
G |
G |
P |
N |
P |
E |
M |
V |
N |
S |
S |
N |
N |
N |
Q |
R |
P |
R |
D |
S |
K |
P |
K |
I |
M |
K |
A |
C |
M |
Y |
F |
N |
S |
A |
R |
G |
C |
R |
H |
G |
A |
N |
C |
M |
Y |
Q |
H |
D |
A |
T |
P |
Y |
Q |
P |
R |
pt000012_POPTR_ |
N |
H |
Q |
I |
- |
- |
G |
T |
S |
Q |
D |
L |
V |
N |
S |
- |
- |
- |
- |
- |
K |
S |
R |
E |
S |
K |
H |
K |
I |
M |
K |
P |
C |
I |
Y |
F |
N |
T |
P |
R |
G |
C |
R |
N |
G |
A |
N |
C |
A |
Y |
Q |
H |
D |
S |
S |
S |
Q |
K |
K |
G |
|
AT1G19860.1 |
N |
L |
N |
N |
G |
N |
I |
N |
T |
S |
D |
M |
Q |
N |
A |
K |
R |
M |
R |
F |
D |
R |
D |
- |
- |
- |
pt000012_POPTR_ |
S |
- |
- |
- |
- |
- |
- |
S |
I |
A |
E |
V |
Q |
S |
A |
K |
R |
M |
K |
M |
D |
R |
E |
I |
S |
S |
|
|